| Package Name | Access | Summary | Updated |
|---|---|---|---|
| swarm | public | A robust and fast clustering method for amplicon-based studies. | 2025-08-28 |
| mreps | public | mreps is a flexible and efficient software for identifying serial repeats (usually called tandem repeats) in DNA sequences. | 2025-08-28 |
| earlgrey | public | Earl Grey: A fully automated TE curation and annotation pipeline. | 2025-08-28 |
| perl-html-tableextract | public | Perl module for extracting the content contained in tables within an HTML document, either as text or encoded element trees. | 2025-08-28 |
| hmftools-redux | public | Post-processing read alignments to control sequencing errors and biases | 2025-08-28 |
| perl-log-any | public | Bringing loggers and listeners together. | 2025-08-28 |
| perl-test2-plugin-nowarnings | public | Fail if tests warn. | 2025-08-28 |
| perl-file-copy-recursive-reduced | public | Recursive copying of files and directories within Perl 5 toolchain. | 2025-08-28 |
| perl-getopt-long-descriptive | public | Getopt::Long, but simpler and more powerful. | 2025-08-28 |
| perl-moosex-getopt | public | A Moose role for processing command line options. | 2025-08-28 |
| perl-bignum | public | Transparent BigNumber support for Perl. | 2025-08-28 |
| perl-pdf-table | public | A utility class for building table layouts in a PDF::API2 object. | 2025-08-28 |
| solvebio | public | The SolveBio Python client. | 2025-08-28 |
| presto | public | A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data. | 2025-08-28 |
| perl-digest-hmac | public | Keyed-Hashing for Message Authentication. | 2025-08-28 |
| trust4 | public | TCR and BCR assembly from bulk or single-cell RNA-seq data. | 2025-08-28 |
| perl-test-class-moose | public | Serious testing for serious Perl. | 2025-08-28 |
| perl-moosex-nonmoose | public | MooseX::NonMoose - easy subclassing of non-Moose classes. | 2025-08-28 |
| align_trim | public | ARTIC align_trim: A tool for trimming amplicon sequencing primers from aligned reads. | 2025-08-28 |
| perl-io-compress | public | IO Interface to compressed data files/buffers. | 2025-08-28 |
| pyopenms | public | Python bindings for OpenMS, an open-source software C++ library for LC-MS data management and analyses. | 2025-08-28 |
| trimmomatic | public | A flexible read trimming tool for Illumina NGS data. | 2025-08-28 |
| abawaca | public | No Summary | 2025-08-28 |
| r-histonehmm | public | histoneHMM is a software to analyse ChIP-seq data of histone modifications with broad genomic footprints like H3K27me3. It allows for calling modified regions in single samples as well as for calling differentially modified regions in a comparison of two samples | 2025-08-28 |
| abundancebin | public | No Summary | 2025-08-28 |
