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strawc
|
public |
Straw bound with pybind11
|
2025-08-04 |
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gocr
|
public |
GOCR is an OCR (Optical Character Recognition) program.
|
2025-08-04 |
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sentieon
|
public |
Accelerated performance bioinformatics tools for mapping and variant calling
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2025-08-04 |
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genbank
|
public |
Code to work with Genbank files
|
2025-08-04 |
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esme_mpich_4_3_1
|
public |
Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.
|
2025-08-04 |
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esme_netcdf-fortran_mpich_4_3_1
|
public |
NetCDF-Fortran - netCDF interface for Fortran
|
2025-08-04 |
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esme_netcdf-c_mpich_4_3_1
|
public |
NetCDF-C - netCDF interface for C
|
2025-08-04 |
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esme_pnetcdf_mpich_4_3_1
|
public |
PnetCDF - Parallel netCDF
|
2025-08-04 |
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esme_pio_mpich_4_3_1
|
public |
ParallelIO - High-level parallel I/O library
|
2025-08-04 |
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esme_omb_mpich_4_3_1
|
public |
OSU Micro Benchmarks
|
2025-08-04 |
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iphop
|
public |
Predict host genus from genomes of uncultivated phages.
|
2025-08-04 |
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esme_hdf5_mpich_4_3_1
|
public |
HDF5 - Hierarchical Data Format 5
|
2025-08-04 |
|
esme_esmf_mpich_4_3_1
|
public |
ESMF - Earth System Modeling Framework
|
2025-08-04 |
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scxmatch
|
public |
Python implementation for single-cell cross match test, an efficient implementation of Rosenbaum's test.
|
2025-08-04 |
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tracy
|
public |
Basecalling, alignment, assembly and deconvolution of Sanger chromatogram trace files
|
2025-08-04 |
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rscape
|
public |
R-scape (RNA Structural Covariation Above Phylogenetic Expectation) looks for evidence of a conserved RNA secondary structure by measuring pairwise covariations observed in an input multiple sequence alignment.
|
2025-08-04 |
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sickle-trim
|
public |
Windowed Adaptive Trimming for fastq files using quality
|
2025-08-04 |
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bifrost
|
public |
Highly parallel construction and indexing of colored and compacted de Bruijn graphs
|
2025-08-04 |
|
libgff
|
public |
A simple "libraryfication" of the GFF/GTF parsing code that is used in GFFRead codebase.
|
2025-08-04 |
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slow5tools
|
public |
Toolkit for S/bLOW5 format
|
2025-08-04 |
|
cooltools
|
public |
Analysis tools for genomic interaction data stored in .cool format
|
2025-08-04 |
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unicycler
|
public |
Hybrid assembly pipeline for bacterial genomes
|
2025-08-04 |
|
yacrd
|
public |
Yet Another Chimeric Read Detector, with long-read mapper result as input.
|
2025-08-04 |
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perl-text-balanced
|
public |
Extract delimited text sequences from strings.
|
2025-08-04 |
|
prophyle
|
public |
ProPhyle is an accurate, resource-frugal and deterministic phylogeny-based metagenomic classifier.
|
2025-08-04 |
