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bioconda / packages / r-sigminer

Genomic alterations including single nucleotide substitution, copy number alteration, etc. are the major force for cancer initialization and development. Due to the specificity of molecular lesions caused by genomic alterations, we can generate characteristic alteration spectra, called 'signature' (Wang, Shixiang, et al. (2020) <DOI:10.1101/2020.04.27.20082404> & Alexandrov, Ludmil B., et al. (2020) <DOI:10.1038/s41586-020-1943-3> & Macintyre, Geoff, et al. (2018) <DOI:10.1038/s41588-018-0179-8>). This package helps users to extract, analyze and visualize signatures from genomic alteration records, thus providing new insight into cancer study.

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Type Size Name Uploaded Downloads Labels
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h3f1888f_1.tar.bz2  4 months and 18 days ago 29 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_1.tar.bz2  4 months and 18 days ago 68 main
conda 4.6 MB | linux-aarch64/r-sigminer-2.3.1-r43hb19973c_1.tar.bz2  4 months and 18 days ago 28 main
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h71b3455_0.tar.bz2  5 months and 26 days ago 363 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_0.tar.bz2  5 months and 26 days ago 40 main
conda 4.2 MB | osx-64/r-sigminer-2.3.0-r43h71b3455_0.tar.bz2  11 months and 5 days ago 680 main
conda 4.2 MB | linux-64/r-sigminer-2.3.0-r43h21a89ab_0.tar.bz2  11 months and 5 days ago 77 main
conda 4.7 MB | osx-64/r-sigminer-2.2.2-r43h71b3455_0.tar.bz2  1 year and 2 months ago 922 main
conda 4.7 MB | linux-64/r-sigminer-2.2.2-r43h21a89ab_0.tar.bz2  1 year and 2 months ago 73 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r43h21a89ab_2.tar.bz2  1 year and 4 months ago 69 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r43h71b3455_2.tar.bz2  1 year and 4 months ago 982 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h71b3455_1.tar.bz2  1 year and 5 months ago 115 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42h21a89ab_1.tar.bz2  1 year and 5 months ago 91 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h71b3455_2.tar.bz2  1 year and 5 months ago 1073 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h63d8054_0.tar.bz2  1 year and 5 months ago 95 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42hecf12ef_0.tar.bz2  1 year and 5 months ago 111 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42h21a89ab_2.tar.bz2  1 year and 6 months ago 80 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42hecf12ef_1.tar.bz2  2 years and 7 days ago 119 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h63d8054_1.tar.bz2  2 years and 7 days ago 422 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r41h63d8054_0.tar.bz2  2 years and 9 days ago 43 main
conda 3.1 MB | linux-64/r-sigminer-2.1.9-r41hecf12ef_0.tar.bz2  2 years and 9 days ago 113 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r42h63d8054_1.tar.bz2  2 years and 15 days ago 1484 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r42hecf12ef_1.tar.bz2  2 years and 15 days ago 107 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r41h63d8054_0.tar.bz2  2 years and 30 days ago 69 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r41hecf12ef_0.tar.bz2  2 years and 30 days ago 101 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_1.tar.bz2  2 years and 2 months ago 1572 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_1.tar.bz2  2 years and 2 months ago 130 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_1.tar.bz2  2 years and 2 months ago 1574 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_0.tar.bz2  2 years and 2 months ago 50 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_0.tar.bz2  2 years and 2 months ago 116 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_1.tar.bz2  2 years and 3 months ago 122 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_0.tar.bz2  2 years and 3 months ago 70 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_0.tar.bz2  2 years and 3 months ago 121 main
conda 3.4 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_1.tar.bz2  2 years and 3 months ago 129 main
conda 3.4 MB | osx-64/r-sigminer-2.1.5-r41h4277420_0.tar.bz2  2 years and 4 months ago 1661 main
conda 3.3 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_0.tar.bz2  2 years and 4 months ago 125 main
conda 2.9 MB | osx-64/r-sigminer-2.1.4-r41h4277420_0.tar.bz2  2 years and 6 months ago 1789 main
conda 2.9 MB | linux-64/r-sigminer-2.1.4-r41hecf12ef_0.tar.bz2  2 years and 6 months ago 135 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_1.tar.bz2  2 years and 8 months ago 1888 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_1.tar.bz2  2 years and 8 months ago 137 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_0.tar.bz2  2 years and 8 months ago 133 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_0.tar.bz2  2 years and 8 months ago 40 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41h4277420_1.tar.bz2  2 years and 8 months ago 49 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41hecf12ef_1.tar.bz2  2 years and 8 months ago 143 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41hdb58930_0.tar.bz2  2 years and 11 months ago 2039 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41h52a8340_0.tar.bz2  2 years and 11 months ago 136 main
conda 3.2 MB | osx-64/r-sigminer-2.1.1-r41hdb58930_0.tar.bz2  3 years and 19 days ago 2145 main
conda 3.2 MB | linux-64/r-sigminer-2.1.1-r41h52a8340_0.tar.bz2  3 years and 19 days ago 161 main
conda 4.9 MB | osx-64/r-sigminer-2.1.0-r41hdb58930_0.tar.bz2  3 years and 1 month ago 2214 main
conda 4.9 MB | linux-64/r-sigminer-2.1.0-r41h52a8340_0.tar.bz2  3 years and 1 month ago 163 main
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