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bioconda / packages / r-sigminer

Genomic alterations including single nucleotide substitution, copy number alteration, etc. are the major force for cancer initialization and development. Due to the specificity of molecular lesions caused by genomic alterations, we can generate characteristic alteration spectra, called 'signature' (Wang, Shixiang, et al. (2020) <DOI:10.1101/2020.04.27.20082404> & Alexandrov, Ludmil B., et al. (2020) <DOI:10.1038/s41586-020-1943-3> & Macintyre, Geoff, et al. (2018) <DOI:10.1038/s41588-018-0179-8>). This package helps users to extract, analyze and visualize signatures from genomic alteration records, thus providing new insight into cancer study.

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Type Size Name Uploaded Downloads Labels
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h3f1888f_1.tar.bz2  8 months and 30 days ago 50 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_1.tar.bz2  8 months and 30 days ago 143 main
conda 4.6 MB | linux-aarch64/r-sigminer-2.3.1-r43hb19973c_1.tar.bz2  8 months and 30 days ago 47 main
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h71b3455_0.tar.bz2  10 months and 7 days ago 588 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_0.tar.bz2  10 months and 7 days ago 73 main
conda 4.2 MB | osx-64/r-sigminer-2.3.0-r43h71b3455_0.tar.bz2  1 year and 3 months ago 909 main
conda 4.2 MB | linux-64/r-sigminer-2.3.0-r43h21a89ab_0.tar.bz2  1 year and 3 months ago 106 main
conda 4.7 MB | osx-64/r-sigminer-2.2.2-r43h71b3455_0.tar.bz2  1 year and 7 months ago 1147 main
conda 4.7 MB | linux-64/r-sigminer-2.2.2-r43h21a89ab_0.tar.bz2  1 year and 7 months ago 104 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r43h21a89ab_2.tar.bz2  1 year and 8 months ago 98 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r43h71b3455_2.tar.bz2  1 year and 8 months ago 1207 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h71b3455_1.tar.bz2  1 year and 9 months ago 128 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42h21a89ab_1.tar.bz2  1 year and 9 months ago 122 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h71b3455_2.tar.bz2  1 year and 10 months ago 1299 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h63d8054_0.tar.bz2  1 year and 10 months ago 106 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42hecf12ef_0.tar.bz2  1 year and 10 months ago 140 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42h21a89ab_2.tar.bz2  1 year and 10 months ago 110 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42hecf12ef_1.tar.bz2  2 years and 4 months ago 148 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h63d8054_1.tar.bz2  2 years and 4 months ago 432 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r41h63d8054_0.tar.bz2  2 years and 4 months ago 53 main
conda 3.1 MB | linux-64/r-sigminer-2.1.9-r41hecf12ef_0.tar.bz2  2 years and 4 months ago 144 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r42h63d8054_1.tar.bz2  2 years and 4 months ago 1709 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r42hecf12ef_1.tar.bz2  2 years and 4 months ago 140 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r41h63d8054_0.tar.bz2  2 years and 5 months ago 78 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r41hecf12ef_0.tar.bz2  2 years and 5 months ago 132 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_1.tar.bz2  2 years and 6 months ago 1795 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_1.tar.bz2  2 years and 6 months ago 159 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_1.tar.bz2  2 years and 6 months ago 1799 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_0.tar.bz2  2 years and 7 months ago 61 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_0.tar.bz2  2 years and 7 months ago 147 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_1.tar.bz2  2 years and 7 months ago 152 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_0.tar.bz2  2 years and 7 months ago 77 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_0.tar.bz2  2 years and 7 months ago 151 main
conda 3.4 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_1.tar.bz2  2 years and 7 months ago 163 main
conda 3.4 MB | osx-64/r-sigminer-2.1.5-r41h4277420_0.tar.bz2  2 years and 9 months ago 1886 main
conda 3.3 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_0.tar.bz2  2 years and 9 months ago 157 main
conda 2.9 MB | osx-64/r-sigminer-2.1.4-r41h4277420_0.tar.bz2  2 years and 10 months ago 2014 main
conda 2.9 MB | linux-64/r-sigminer-2.1.4-r41hecf12ef_0.tar.bz2  2 years and 10 months ago 169 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_1.tar.bz2  3 years and 19 days ago 2113 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_1.tar.bz2  3 years and 19 days ago 167 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_0.tar.bz2  3 years and 20 days ago 166 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_0.tar.bz2  3 years and 20 days ago 49 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41h4277420_1.tar.bz2  3 years and 1 month ago 58 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41hecf12ef_1.tar.bz2  3 years and 1 month ago 173 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41hdb58930_0.tar.bz2  3 years and 3 months ago 2265 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41h52a8340_0.tar.bz2  3 years and 3 months ago 166 main
conda 3.2 MB | osx-64/r-sigminer-2.1.1-r41hdb58930_0.tar.bz2  3 years and 5 months ago 2373 main
conda 3.2 MB | linux-64/r-sigminer-2.1.1-r41h52a8340_0.tar.bz2  3 years and 5 months ago 193 main
conda 4.9 MB | osx-64/r-sigminer-2.1.0-r41hdb58930_0.tar.bz2  3 years and 6 months ago 2440 main
conda 4.9 MB | linux-64/r-sigminer-2.1.0-r41h52a8340_0.tar.bz2  3 years and 6 months ago 195 main
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