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bioconda / packages / r-sigminer

Genomic alterations including single nucleotide substitution, copy number alteration, etc. are the major force for cancer initialization and development. Due to the specificity of molecular lesions caused by genomic alterations, we can generate characteristic alteration spectra, called 'signature' (Wang, Shixiang, et al. (2020) <DOI:10.1101/2020.04.27.20082404> & Alexandrov, Ludmil B., et al. (2020) <DOI:10.1038/s41586-020-1943-3> & Macintyre, Geoff, et al. (2018) <DOI:10.1038/s41588-018-0179-8>). This package helps users to extract, analyze and visualize signatures from genomic alteration records, thus providing new insight into cancer study.

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Type Size Name Uploaded Downloads Labels
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h3f1888f_1.tar.bz2  4 months and 18 days ago 30 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_1.tar.bz2  4 months and 18 days ago 69 main
conda 4.6 MB | linux-aarch64/r-sigminer-2.3.1-r43hb19973c_1.tar.bz2  4 months and 18 days ago 29 main
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h71b3455_0.tar.bz2  5 months and 26 days ago 364 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_0.tar.bz2  5 months and 26 days ago 41 main
conda 4.2 MB | osx-64/r-sigminer-2.3.0-r43h71b3455_0.tar.bz2  11 months and 5 days ago 681 main
conda 4.2 MB | linux-64/r-sigminer-2.3.0-r43h21a89ab_0.tar.bz2  11 months and 5 days ago 78 main
conda 4.7 MB | osx-64/r-sigminer-2.2.2-r43h71b3455_0.tar.bz2  1 year and 2 months ago 922 main
conda 4.7 MB | linux-64/r-sigminer-2.2.2-r43h21a89ab_0.tar.bz2  1 year and 2 months ago 74 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r43h21a89ab_2.tar.bz2  1 year and 4 months ago 69 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r43h71b3455_2.tar.bz2  1 year and 4 months ago 983 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h71b3455_1.tar.bz2  1 year and 5 months ago 116 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42h21a89ab_1.tar.bz2  1 year and 5 months ago 92 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h71b3455_2.tar.bz2  1 year and 5 months ago 1074 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h63d8054_0.tar.bz2  1 year and 5 months ago 96 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42hecf12ef_0.tar.bz2  1 year and 5 months ago 112 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42h21a89ab_2.tar.bz2  1 year and 6 months ago 81 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42hecf12ef_1.tar.bz2  2 years and 7 days ago 120 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h63d8054_1.tar.bz2  2 years and 7 days ago 423 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r41h63d8054_0.tar.bz2  2 years and 9 days ago 44 main
conda 3.1 MB | linux-64/r-sigminer-2.1.9-r41hecf12ef_0.tar.bz2  2 years and 9 days ago 114 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r42h63d8054_1.tar.bz2  2 years and 15 days ago 1485 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r42hecf12ef_1.tar.bz2  2 years and 15 days ago 108 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r41h63d8054_0.tar.bz2  2 years and 30 days ago 70 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r41hecf12ef_0.tar.bz2  2 years and 30 days ago 101 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_1.tar.bz2  2 years and 2 months ago 1573 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_1.tar.bz2  2 years and 2 months ago 131 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_1.tar.bz2  2 years and 2 months ago 1574 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_0.tar.bz2  2 years and 2 months ago 51 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_0.tar.bz2  2 years and 2 months ago 117 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_1.tar.bz2  2 years and 3 months ago 122 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_0.tar.bz2  2 years and 3 months ago 71 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_0.tar.bz2  2 years and 3 months ago 122 main
conda 3.4 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_1.tar.bz2  2 years and 3 months ago 130 main
conda 3.4 MB | osx-64/r-sigminer-2.1.5-r41h4277420_0.tar.bz2  2 years and 4 months ago 1662 main
conda 3.3 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_0.tar.bz2  2 years and 4 months ago 125 main
conda 2.9 MB | osx-64/r-sigminer-2.1.4-r41h4277420_0.tar.bz2  2 years and 6 months ago 1790 main
conda 2.9 MB | linux-64/r-sigminer-2.1.4-r41hecf12ef_0.tar.bz2  2 years and 6 months ago 136 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_1.tar.bz2  2 years and 8 months ago 1889 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_1.tar.bz2  2 years and 8 months ago 138 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_0.tar.bz2  2 years and 8 months ago 134 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_0.tar.bz2  2 years and 8 months ago 41 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41h4277420_1.tar.bz2  2 years and 8 months ago 49 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41hecf12ef_1.tar.bz2  2 years and 8 months ago 144 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41hdb58930_0.tar.bz2  2 years and 11 months ago 2040 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41h52a8340_0.tar.bz2  2 years and 11 months ago 137 main
conda 3.2 MB | osx-64/r-sigminer-2.1.1-r41hdb58930_0.tar.bz2  3 years and 19 days ago 2146 main
conda 3.2 MB | linux-64/r-sigminer-2.1.1-r41h52a8340_0.tar.bz2  3 years and 19 days ago 162 main
conda 4.9 MB | osx-64/r-sigminer-2.1.0-r41hdb58930_0.tar.bz2  3 years and 1 month ago 2215 main
conda 4.9 MB | linux-64/r-sigminer-2.1.0-r41h52a8340_0.tar.bz2  3 years and 1 month ago 164 main
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