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bioconda / packages / r-rtfbs

Identifies and scores possible Transcription Factor Binding Sites and allows for FDR analysis and pruning. It supports splitting of sequences based on size or a specified GFF, grouping by G+C content, and specification of Markov model order. The heavy lifting is done in C while all results are made available via R.

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Type Size Name Uploaded Downloads Labels
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r42hfa19939_7.tar.bz2  1 year and 8 months ago 1127 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r42h56115f1_7.tar.bz2  1 year and 8 months ago 93 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r42h73dbb54_6.tar.bz2  2 years and 3 months ago 119 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r42h9f1ad2d_6.tar.bz2  2 years and 3 months ago 402 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r41h5aaf88b_5.tar.bz2  2 years and 11 months ago 39 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r41h73dbb54_5.tar.bz2  2 years and 11 months ago 144 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r41hdf9a8c9_4.tar.bz2  3 years and 8 months ago 177 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r41h9e43be8_4.tar.bz2  3 years and 8 months ago 963 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r40hdf9a8c9_3.tar.bz2  3 years and 10 months ago 172 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r40h9e43be8_3.tar.bz2  3 years and 10 months ago 183 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r40hcdcec82_2.tar.bz2  4 years and 8 months ago 197 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r40h17f1fa6_2.tar.bz2  4 years and 8 months ago 656 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r40hcdcec82_1.tar.bz2  4 years and 8 months ago 201 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r40h17f1fa6_1.tar.bz2  4 years and 8 months ago 52 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r36h159158b_0.tar.bz2  5 years and 16 days ago 294 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r36hcdcec82_0.tar.bz2  5 years and 16 days ago 222 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.9-r36h159158b_3.tar.bz2  5 years and 3 months ago 3526 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.9-r36hcdcec82_3.tar.bz2  5 years and 3 months ago 230 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.9-r36h159158b_2.tar.bz2  5 years and 5 months ago 207 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.9-r36hcdcec82_2.tar.bz2  5 years and 5 months ago 231 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.9-r351h46e59ec_1.tar.bz2  5 years and 10 months ago 92 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.9-r351h96ca727_1.tar.bz2  5 years and 10 months ago 287 main
conda 1.1 MB | osx-64/r-rtfbs-0.3.9-r351hc070d10_0.tar.bz2  6 years and 11 days ago 279 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.9-r351h96ca727_0.tar.bz2  6 years and 1 month ago 293 main gcc7
conda 1.2 MB | osx-64/r-rtfbs-0.3.9-r351h46e59ec_0.tar.bz2  6 years and 1 month ago 223 main gcc7
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