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bioconda / packages / r-rtfbs

Identifies and scores possible Transcription Factor Binding Sites and allows for FDR analysis and pruning. It supports splitting of sequences based on size or a specified GFF, grouping by G+C content, and specification of Markov model order. The heavy lifting is done in C while all results are made available via R.

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Type Size Name Uploaded Downloads Labels
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r42hfa19939_7.tar.bz2  1 year and 9 months ago 1149 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r42h56115f1_7.tar.bz2  1 year and 9 months ago 102 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r42h73dbb54_6.tar.bz2  2 years and 4 months ago 128 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r42h9f1ad2d_6.tar.bz2  2 years and 4 months ago 407 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r41h5aaf88b_5.tar.bz2  3 years and 14 days ago 44 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r41h73dbb54_5.tar.bz2  3 years and 14 days ago 153 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r41hdf9a8c9_4.tar.bz2  3 years and 9 months ago 186 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r41h9e43be8_4.tar.bz2  3 years and 9 months ago 968 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r40hdf9a8c9_3.tar.bz2  3 years and 11 months ago 181 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r40h9e43be8_3.tar.bz2  3 years and 11 months ago 186 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r40hcdcec82_2.tar.bz2  4 years and 9 months ago 206 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r40h17f1fa6_2.tar.bz2  4 years and 9 months ago 661 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r40hcdcec82_1.tar.bz2  4 years and 9 months ago 210 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r40h17f1fa6_1.tar.bz2  4 years and 9 months ago 58 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.15-r36h159158b_0.tar.bz2  5 years and 1 month ago 299 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.15-r36hcdcec82_0.tar.bz2  5 years and 1 month ago 231 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.9-r36h159158b_3.tar.bz2  5 years and 4 months ago 3545 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.9-r36hcdcec82_3.tar.bz2  5 years and 4 months ago 239 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.9-r36h159158b_2.tar.bz2  5 years and 7 months ago 210 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.9-r36hcdcec82_2.tar.bz2  5 years and 7 months ago 239 main
conda 1.2 MB | osx-64/r-rtfbs-0.3.9-r351h46e59ec_1.tar.bz2  5 years and 11 months ago 96 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.9-r351h96ca727_1.tar.bz2  5 years and 11 months ago 296 main
conda 1.1 MB | osx-64/r-rtfbs-0.3.9-r351hc070d10_0.tar.bz2  6 years and 1 month ago 283 main
conda 1.3 MB | linux-64/r-rtfbs-0.3.9-r351h96ca727_0.tar.bz2  6 years and 2 months ago 302 main gcc7
conda 1.2 MB | osx-64/r-rtfbs-0.3.9-r351h46e59ec_0.tar.bz2  6 years and 2 months ago 227 main gcc7
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