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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.6 MB | noarch/hmftools-sage-4.1-hdfd78af_0.tar.bz2  1 month and 23 hours ago 33 main
conda 15.9 MB | noarch/hmftools-sage-4.0-hdfd78af_0.tar.bz2  6 months and 3 days ago 234 main
conda 15.4 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_4.tar.bz2  8 months and 27 days ago 325 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  9 months and 17 days ago 128 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  9 months and 24 days ago 103 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  10 months and 12 days ago 121 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  10 months and 17 days ago 96 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  1 year and 2 months ago 296 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  1 year and 3 months ago 322 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  1 year and 5 months ago 381 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  1 year and 5 months ago 392 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  1 year and 6 months ago 873 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  1 year and 6 months ago 110 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  2 years and 6 months ago 1588 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  3 years and 1 month ago 1963 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  3 years and 2 months ago 1994 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  3 years and 2 months ago 2006 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  3 years and 3 months ago 2095 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  3 years and 5 months ago 2277 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  4 years and 4 months ago 725 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  4 years and 4 months ago 2643 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  4 years and 5 months ago 231 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  4 years and 7 months ago 2683 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  4 years and 8 months ago 2647 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 9 months ago 2653 main
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