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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  4 days and 7 hours ago 23 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  10 days and 10 hours ago 36 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  30 days and 4 hours ago 53 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  1 month and 4 days ago 32 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  4 months and 27 days ago 166 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  5 months and 29 days ago 203 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  8 months and 2 days ago 267 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  8 months and 12 days ago 279 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  8 months and 27 days ago 548 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  9 months and 1 day ago 47 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  1 year and 8 months ago 1289 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  2 years and 3 months ago 1638 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  2 years and 4 months ago 1695 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  2 years and 5 months ago 1710 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  2 years and 6 months ago 1795 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  2 years and 8 months ago 1953 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  3 years and 6 months ago 664 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  3 years and 7 months ago 2316 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  3 years and 7 months ago 174 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  3 years and 9 months ago 2355 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  3 years and 10 months ago 2322 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 15 days ago 2329 main
conda 21.0 MB | noarch/hmftools-sage-2.3-0.tar.bz2  4 years and 1 month ago 2332 main
conda 19.3 MB | noarch/hmftools-sage-2.2-2.tar.bz2  4 years and 2 months ago 2328 main
conda 19.3 MB | noarch/hmftools-sage-2.2-1.tar.bz2  4 years and 2 months ago 196 main
conda 19.3 MB | noarch/hmftools-sage-2.2-0.tar.bz2  4 years and 3 months ago 203 main
conda 17.9 MB | noarch/hmftools-sage-1.0-0.tar.bz2  5 years and 7 months ago 2751 main
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