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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.9 MB | noarch/hmftools-sage-4.0-hdfd78af_0.tar.bz2  1 month and 17 hours ago 79 main
conda 15.4 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_4.tar.bz2  3 months and 21 days ago 227 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  4 months and 14 days ago 89 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  4 months and 18 days ago 64 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  5 months and 9 days ago 84 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  5 months and 14 days ago 59 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  9 months and 7 days ago 250 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  10 months and 8 days ago 280 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  1 year and 12 days ago 340 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  1 year and 20 days ago 352 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  1 year and 1 month ago 783 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  1 year and 1 month ago 74 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  2 years and 1 month ago 1495 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  2 years and 8 months ago 1872 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  2 years and 9 months ago 1905 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  2 years and 9 months ago 1919 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  2 years and 10 months ago 2005 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  3 years and 16 days ago 2187 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  3 years and 11 months ago 690 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  3 years and 11 months ago 2551 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  4 years and 3 days ago 199 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  4 years and 2 months ago 2591 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  4 years and 3 months ago 2555 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 4 months ago 2562 main
conda 21.0 MB | noarch/hmftools-sage-2.3-0.tar.bz2  4 years and 5 months ago 2567 main
conda 19.3 MB | noarch/hmftools-sage-2.2-2.tar.bz2  4 years and 6 months ago 2562 main
conda 19.3 MB | noarch/hmftools-sage-2.2-1.tar.bz2  4 years and 6 months ago 222 main
conda 19.3 MB | noarch/hmftools-sage-2.2-0.tar.bz2  4 years and 7 months ago 231 main
conda 17.9 MB | noarch/hmftools-sage-1.0-0.tar.bz2  5 years and 11 months ago 2984 main
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