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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.6 MB | noarch/hmftools-sage-4.1-hdfd78af_0.tar.bz2  2 months and 20 days ago 94 main
conda 15.9 MB | noarch/hmftools-sage-4.0-hdfd78af_0.tar.bz2  7 months and 23 days ago 284 main
conda 15.4 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_4.tar.bz2  10 months and 16 days ago 376 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  11 months and 7 days ago 138 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  11 months and 12 days ago 114 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  1 year and 2 days ago 132 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  1 year and 7 days ago 106 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  1 year and 3 months ago 308 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  1 year and 5 months ago 334 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  1 year and 7 months ago 393 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  1 year and 7 months ago 403 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  1 year and 7 months ago 920 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  1 year and 8 months ago 121 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  2 years and 7 months ago 1599 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  3 years and 2 months ago 2010 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  3 years and 4 months ago 2006 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  3 years and 4 months ago 2017 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  3 years and 5 months ago 2107 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  3 years and 7 months ago 2324 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  4 years and 5 months ago 736 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  4 years and 6 months ago 2690 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  4 years and 6 months ago 241 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  4 years and 8 months ago 2730 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  4 years and 9 months ago 2694 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 11 months ago 2700 main
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