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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  3 months and 4 days ago 110 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  4 months and 6 days ago 155 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  6 months and 10 days ago 218 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  6 months and 20 days ago 232 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  7 months and 4 days ago 447 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  7 months and 9 days ago 39 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  1 year and 6 months ago 1192 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  2 years and 2 months ago 1538 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  2 years and 3 months ago 1598 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  2 years and 3 months ago 1612 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  2 years and 4 months ago 1697 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  2 years and 6 months ago 1852 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  3 years and 5 months ago 658 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  3 years and 5 months ago 2217 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  3 years and 6 months ago 167 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  3 years and 8 months ago 2255 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  3 years and 9 months ago 2222 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  3 years and 10 months ago 2229 main
conda 21.0 MB | noarch/hmftools-sage-2.3-0.tar.bz2  3 years and 11 months ago 2232 main
conda 19.3 MB | noarch/hmftools-sage-2.2-2.tar.bz2  4 years and 8 days ago 2228 main
conda 19.3 MB | noarch/hmftools-sage-2.2-1.tar.bz2  4 years and 9 days ago 189 main
conda 19.3 MB | noarch/hmftools-sage-2.2-0.tar.bz2  4 years and 1 month ago 197 main
conda 17.9 MB | noarch/hmftools-sage-1.0-0.tar.bz2  5 years and 5 months ago 2650 main
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