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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.6 MB | noarch/hmftools-sage-4.1-hdfd78af_0.tar.bz2  21 days and 6 hours ago 28 main
conda 15.9 MB | noarch/hmftools-sage-4.0-hdfd78af_0.tar.bz2  5 months and 24 days ago 232 main
conda 15.4 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_4.tar.bz2  8 months and 17 days ago 323 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  9 months and 7 days ago 126 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  9 months and 13 days ago 101 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  10 months and 2 days ago 120 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  10 months and 6 days ago 94 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  1 year and 1 month ago 294 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  1 year and 3 months ago 320 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  1 year and 5 months ago 379 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  1 year and 5 months ago 390 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  1 year and 5 months ago 872 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  1 year and 6 months ago 108 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  2 years and 5 months ago 1586 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  3 years and 26 days ago 1961 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  3 years and 2 months ago 1992 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  3 years and 2 months ago 2004 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  3 years and 3 months ago 2093 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  3 years and 5 months ago 2276 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  4 years and 3 months ago 723 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  4 years and 4 months ago 2641 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  4 years and 4 months ago 230 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  4 years and 6 months ago 2681 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  4 years and 7 months ago 2645 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 9 months ago 2652 main
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