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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.6 MB | noarch/hmftools-sage-4.1-hdfd78af_0.tar.bz2  2 months and 24 days ago 111 main
conda 15.9 MB | noarch/hmftools-sage-4.0-hdfd78af_0.tar.bz2  7 months and 27 days ago 288 main
conda 15.4 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_4.tar.bz2  10 months and 20 days ago 380 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  11 months and 11 days ago 139 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  11 months and 16 days ago 115 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  1 year and 6 days ago 133 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  1 year and 11 days ago 107 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  1 year and 4 months ago 309 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  1 year and 5 months ago 335 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  1 year and 7 months ago 394 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  1 year and 7 months ago 404 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  1 year and 8 months ago 924 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  1 year and 8 months ago 122 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  2 years and 7 months ago 1600 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  3 years and 3 months ago 2014 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  3 years and 4 months ago 2007 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  3 years and 4 months ago 2018 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  3 years and 5 months ago 2108 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  3 years and 7 months ago 2328 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  4 years and 6 months ago 737 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  4 years and 6 months ago 2694 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  4 years and 6 months ago 242 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  4 years and 9 months ago 2734 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  4 years and 9 months ago 2698 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 11 months ago 2704 main
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