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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.4 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_4.tar.bz2  27 days and 15 hours ago 84 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  1 month and 18 days ago 68 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  1 month and 23 days ago 43 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  2 months and 13 days ago 59 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  2 months and 18 days ago 37 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  6 months and 10 days ago 207 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  7 months and 12 days ago 243 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  9 months and 16 days ago 303 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  9 months and 26 days ago 316 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  10 months and 10 days ago 642 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  10 months and 15 days ago 53 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  1 year and 10 months ago 1383 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  2 years and 5 months ago 1733 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  2 years and 6 months ago 1788 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  2 years and 6 months ago 1803 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  2 years and 7 months ago 1888 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  2 years and 9 months ago 2050 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  3 years and 8 months ago 672 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  3 years and 8 months ago 2413 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  3 years and 9 months ago 181 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  3 years and 11 months ago 2453 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  4 years and 6 days ago 2417 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 1 month ago 2425 main
conda 21.0 MB | noarch/hmftools-sage-2.3-0.tar.bz2  4 years and 2 months ago 2428 main
conda 19.3 MB | noarch/hmftools-sage-2.2-2.tar.bz2  4 years and 3 months ago 2423 main
conda 19.3 MB | noarch/hmftools-sage-2.2-1.tar.bz2  4 years and 3 months ago 203 main
conda 19.3 MB | noarch/hmftools-sage-2.2-0.tar.bz2  4 years and 4 months ago 211 main
conda 17.9 MB | noarch/hmftools-sage-1.0-0.tar.bz2  5 years and 8 months ago 2846 main
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