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bioconductor-dnabarcodes

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A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-dnabarcodes

Usage Tracking

1.36.0
1.32.0
1.30.0
1.28.0
1.24.0
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

The package offers a function to create DNA barcode sets capable of correcting insertion, deletion, and substitution errors. Existing barcodes can be analysed regarding their minimal, maximal and average distances between barcodes. Finally, reads that start with a (possibly mutated) barcode can be demultiplexed, i.e., assigned to their original reference barcode.

About

Summary

A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments

Last Updated

Dec 14, 2024 at 15:08

License

GPL-2

Total Downloads

46.7K

Supported Platforms

linux-64
macOS-64