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bioconda / packages / bioconductor-dnabarcodes 1.36.0

A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.36.0
  • osx-64 v1.36.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-dnabarcodes
conda install bioconda/label/cf201901::bioconductor-dnabarcodes
conda install bioconda/label/gcc7::bioconductor-dnabarcodes

Description

The package offers a function to create DNA barcode sets capable of correcting insertion, deletion, and substitution errors. Existing barcodes can be analysed regarding their minimal, maximal and average distances between barcodes. Finally, reads that start with a (possibly mutated) barcode can be demultiplexed, i.e., assigned to their original reference barcode.


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