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bioconda / packages / bioconductor-bsgenome.btaurus.ucsc.bostau3.masked

Full genome sequences for Bos taurus (Cow) as provided by UCSC (bosTau3, Aug. 2006) and stored in Biostrings objects. The sequences are the same as in BSgenome.Btaurus.UCSC.bosTau3, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

Type Size Name Uploaded Downloads Labels
conda 9.4 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r44hdfd78af_13.tar.bz2  2 months and 15 days ago 133 main
conda 9.3 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r43hdfd78af_12.tar.bz2  1 year and 3 months ago 797 main
conda 9.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r43hdfd78af_11.tar.bz2  1 year and 8 months ago 367 main
conda 8.7 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r42hdfd78af_10.tar.bz2  2 years and 4 months ago 591 main
conda 9.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_9.tar.bz2  2 years and 7 months ago 243 main
conda 8.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_8.tar.bz2  3 years and 4 months ago 639 main
conda 8.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_7.tar.bz2  3 years and 9 months ago 298 main
conda 8.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40hdfd78af_6.tar.bz2  3 years and 11 months ago 176 main
conda 7.7 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40_5.tar.bz2  4 years and 4 months ago 192 main
conda 7.5 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40_4.tar.bz2  4 years and 10 months ago 205 main
conda 7.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r36_3.tar.bz2  5 years and 4 months ago 219 main
conda 7.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r36_2.tar.bz2  5 years and 7 months ago 234 main
conda 6.5 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r351_0.tar.bz2  6 years and 3 months ago 268 main gcc7

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