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bioconda / packages / bioconductor-bsgenome.btaurus.ucsc.bostau3.masked

Full genome sequences for Bos taurus (Cow) as provided by UCSC (bosTau3, Aug. 2006) and stored in Biostrings objects. The sequences are the same as in BSgenome.Btaurus.UCSC.bosTau3, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

Type Size Name Uploaded Downloads Labels
conda 9.4 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r44hdfd78af_13.tar.bz2  7 months and 18 days ago 245 main
conda 9.3 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r43hdfd78af_12.tar.bz2  1 year and 8 months ago 836 main
conda 9.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r43hdfd78af_11.tar.bz2  2 years and 1 month ago 405 main
conda 8.7 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r42hdfd78af_10.tar.bz2  2 years and 9 months ago 629 main
conda 9.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_9.tar.bz2  3 years and 3 days ago 280 main
conda 8.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_8.tar.bz2  3 years and 9 months ago 674 main
conda 8.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_7.tar.bz2  4 years and 2 months ago 335 main
conda 8.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40hdfd78af_6.tar.bz2  4 years and 4 months ago 213 main
conda 7.7 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40_5.tar.bz2  4 years and 9 months ago 228 main
conda 7.5 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40_4.tar.bz2  5 years and 3 months ago 242 main
conda 7.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r36_3.tar.bz2  5 years and 9 months ago 256 main
conda 7.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r36_2.tar.bz2  6 years and 6 days ago 270 main
conda 6.5 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r351_0.tar.bz2  6 years and 8 months ago 305 main gcc7

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