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bioconda / packages / bioconductor-bsgenome.btaurus.ucsc.bostau3.masked

Full genome sequences for Bos taurus (Cow) as provided by UCSC (bosTau3, Aug. 2006) and stored in Biostrings objects. The sequences are the same as in BSgenome.Btaurus.UCSC.bosTau3, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

Type Size Name Uploaded Downloads Labels
conda 9.4 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r44hdfd78af_13.tar.bz2  2 months and 14 days ago 130 main
conda 9.3 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r43hdfd78af_12.tar.bz2  1 year and 3 months ago 796 main
conda 9.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r43hdfd78af_11.tar.bz2  1 year and 8 months ago 366 main
conda 8.7 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r42hdfd78af_10.tar.bz2  2 years and 4 months ago 590 main
conda 9.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_9.tar.bz2  2 years and 6 months ago 242 main
conda 8.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_8.tar.bz2  3 years and 4 months ago 638 main
conda 8.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_7.tar.bz2  3 years and 9 months ago 297 main
conda 8.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40hdfd78af_6.tar.bz2  3 years and 11 months ago 175 main
conda 7.7 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40_5.tar.bz2  4 years and 4 months ago 191 main
conda 7.5 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40_4.tar.bz2  4 years and 10 months ago 204 main
conda 7.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r36_3.tar.bz2  5 years and 4 months ago 218 main
conda 7.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r36_2.tar.bz2  5 years and 7 months ago 233 main
conda 6.5 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r351_0.tar.bz2  6 years and 3 months ago 267 main gcc7

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