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Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data. AfterQC can simply go through all fastq files in a folder and then output three folders: good, bad and QC folders, which contains good reads, bad reads and the QC results of each fastq file/pair. Currently it supports processing data from HiSeq 2000/2500/3000/4000, Nextseq 500/550, MiniSeq...and other Illumina 1.8 or newer formats.

Type Size Name Uploaded Downloads Labels
conda 30.8 kB | noarch/afterqc-0.9.7-hdfd78af_4.tar.bz2  3 years and 7 months ago 2700 main
conda 30.1 kB | noarch/afterqc-0.9.7-3.tar.bz2  5 years and 5 days ago 396 main
conda 58.0 kB | linux-64/afterqc-0.9.7-py27_2.tar.bz2  6 years and 4 months ago 857 main cf201901
conda 58.2 kB | osx-64/afterqc-0.9.7-py27_2.tar.bz2  6 years and 4 months ago 2095 main cf201901
conda 57.8 kB | linux-64/afterqc-0.9.7-py27_0.tar.bz2  6 years and 4 months ago 588 main cf201901
conda 57.8 kB | osx-64/afterqc-0.9.7-py27_0.tar.bz2  6 years and 4 months ago 209 main cf201901
conda 56.1 kB | osx-64/afterqc-0.9.6-py27_0.tar.bz2  7 years and 1 month ago 4228 main cf201901
conda 56.2 kB | linux-64/afterqc-0.9.6-py27_0.tar.bz2  7 years and 1 month ago 1069 main cf201901

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