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petrnovak / packages / tidecluster

TideCluster is a wrapper for TideHunter for identifying and characterizing tandem repeats in genome assemblies. It clusters similar repeats using MMseqs2 and BLAST, annotates them with RepeatMasker, and analyzes them with TAREAN.

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Type Size Name Uploaded Downloads Labels
conda 5.3 MB | noarch/tidecluster-1.9.3-0.conda  15 days and 22 hours ago 8 main
conda 5.8 MB | noarch/tidecluster-1.9.2-0.conda  15 days and 23 hours ago 6 main
conda 5.6 MB | noarch/tidecluster-1.9.1-0.conda  16 days and 1 hour ago 6 main
conda 7.2 MB | noarch/tidecluster-1.8.3-0.tar.bz2  1 month and 4 days ago 3 main
conda 3.4 MB | linux-64/tidecluster-1.8.2-0.tar.bz2  1 month and 16 days ago 47 main
conda 3.4 MB | linux-64/tidecluster-1.8.1-0.tar.bz2  1 month and 21 days ago 6 main
conda 3.5 MB | linux-64/tidecluster-1.8.0-0.tar.bz2  6 months and 5 days ago 45 main
conda 3.5 MB | linux-64/tidecluster-1.7.1-0.tar.bz2  7 months and 14 days ago 15 main
conda 3.4 MB | linux-64/tidecluster-1.6.2-0.tar.bz2  10 months and 13 days ago 40 main
conda 3.4 MB | linux-64/tidecluster-1.6.1-0.tar.bz2  1 year and 19 days ago 29 main
conda 3.4 MB | linux-64/tidecluster-1.6-0.tar.bz2  1 year and 6 months ago 53 main
conda 3.4 MB | linux-64/tidecluster-1.5-0.tar.bz2  2 years and 2 months ago 100 main
conda 3.3 MB | linux-64/tidecluster-1.4-0.tar.bz2  2 years and 5 months ago 17 main
conda 3.3 MB | linux-64/tidecluster-1.3-0.tar.bz2  2 years and 7 months ago 11 main
conda 3.3 MB | linux-64/tidecluster-1.2-0.tar.bz2  2 years and 7 months ago 12 main
conda 3.3 MB | linux-64/tidecluster-1.1-0.tar.bz2  2 years and 8 months ago 10 main
conda 3.3 MB | linux-64/tidecluster-1.0-0.tar.bz2  2 years and 9 months ago 12 main
conda 3.3 MB | linux-64/tidecluster-0.9-0.tar.bz2  2 years and 9 months ago 4 main
conda 3.3 MB | linux-64/tidecluster-0.0.8-0.tar.bz2  3 years and 21 days ago 26 main
conda 2.9 MB | linux-64/tidecluster-0.0.7-0.tar.bz2  3 years and 27 days ago 9 main
conda 2.9 MB | linux-64/tidecluster-0.0.6-0.tar.bz2  3 years and 27 days ago 9 main
conda 2.9 MB | linux-64/tidecluster-0.0.5-0.tar.bz2  3 years and 1 month ago 12 main
conda 2.9 MB | linux-64/tidecluster-0.0.4-0.tar.bz2  3 years and 1 month ago 9 main
conda 2.9 MB | linux-64/tidecluster-0.0.3-0.tar.bz2  3 years and 2 months ago 7 main
conda 2.9 MB | linux-64/tidecluster-0.0.2-0.tar.bz2  3 years and 2 months ago 7 main
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