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petrnovak / packages / tidecluster

TideCluster is a wrapper for TideHunter for identifying and characterizing tandem repeats in genome assemblies. It clusters similar repeats using MMseqs2 and BLAST, annotates them with RepeatMasker, and analyzes them with TAREAN.

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Type Size Name Uploaded Downloads Labels
conda 5.4 MB | noarch/tidecluster-1.15.2-0.conda  15 hours and 22 minutes ago 2 main
conda 6.1 MB | noarch/tidecluster-1.15.1-0.conda  1 day and 20 hours ago 2 main
conda 5.8 MB | noarch/tidecluster-1.15.0-0.conda  2 days and 15 hours ago 4 main
conda 5.5 MB | noarch/tidecluster-1.14.1-0.conda  3 days and 5 hours ago 2 main
conda 5.8 MB | noarch/tidecluster-1.14.0-0.conda  3 days and 6 hours ago 1 main
conda 5.9 MB | noarch/tidecluster-1.13.1-0.conda  7 days and 3 hours ago 1 main
conda 5.2 MB | noarch/tidecluster-1.12.2-0.conda  8 days and 13 hours ago 1 main
conda 5.6 MB | noarch/tidecluster-1.12.1-0.conda  8 days and 15 hours ago 1 main
conda 5.0 MB | noarch/tidecluster-1.12.0-0.conda  8 days and 22 hours ago 0 main
conda 5.4 MB | noarch/tidecluster-1.11.0-0.conda  9 days and 23 hours ago 1 main
conda 5.5 MB | noarch/tidecluster-1.10.6-0.conda  10 days and 5 hours ago 2 main
conda 5.6 MB | noarch/tidecluster-1.10.5-0.conda  10 days and 22 hours ago 1 main
conda 5.8 MB | noarch/tidecluster-1.10.4-0.conda  10 days and 23 hours ago 1 main
conda 5.5 MB | noarch/tidecluster-1.10.3-0.conda  12 days and 1 hour ago 1 main
conda 5.9 MB | noarch/tidecluster-1.10.2-0.conda  14 days and 13 hours ago 0 main
conda 5.7 MB | noarch/tidecluster-1.10.1-0.conda  14 days and 19 hours ago 2 main
conda 5.3 MB | noarch/tidecluster-1.9.3-0.conda  1 month and 5 days ago 8 main
conda 5.8 MB | noarch/tidecluster-1.9.2-0.conda  1 month and 5 days ago 6 main
conda 5.6 MB | noarch/tidecluster-1.9.1-0.conda  1 month and 5 days ago 6 main
conda 7.2 MB | noarch/tidecluster-1.8.3-0.tar.bz2  1 month and 25 days ago 3 main
conda 3.4 MB | linux-64/tidecluster-1.8.2-0.tar.bz2  2 months and 5 days ago 48 main
conda 3.4 MB | linux-64/tidecluster-1.8.1-0.tar.bz2  2 months and 11 days ago 6 main
conda 3.5 MB | linux-64/tidecluster-1.8.0-0.tar.bz2  6 months and 26 days ago 45 main
conda 3.5 MB | linux-64/tidecluster-1.7.1-0.tar.bz2  8 months and 3 days ago 15 main
conda 3.4 MB | linux-64/tidecluster-1.6.2-0.tar.bz2  11 months and 2 days ago 40 main
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