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pysam

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Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

Installation

To install this package, run one of the following:

Conda
$conda install nanoporetech::pysam

Usage Tracking

0.22.0
0.21.0
0.19.1
3 / 8 versions selected
Total downloads: 0

About

Summary

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

Information Last Updated

Mar 25, 2025 at 16:23

License

MIT

Total Downloads

4.6K

Platforms

macOS arm64 Version: 0.22.0
Linux 64 Version: 0.22.0
Linux aarch64 Version: 0.22.0
macOS 64 Version: 0.22.0