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feh
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public |
feh is an X11 image viewer aimed mostly at console users.
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2025-03-25 |
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imlib2
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public |
Imlib 2 is the successor to Imlib. It is NOT a newer version - it is a completely new library.
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2025-03-25 |
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sss-test
|
public |
Selection on the Secondary Structure-test: a test that detects positive and negative selection from a set of orthologs, either small or long ncRNAs.
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2025-03-25 |
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perl-fast
|
public |
FAST Analysis of Sequences Toolbox
|
2025-03-25 |
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perl-sort-key
|
public |
The fastest way to sort anything in Perl
|
2025-03-25 |
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perl-sort-mergesort
|
public |
Merge sorted streams to create a new stream
|
2025-03-25 |
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nofold
|
public |
NoFold is an approach for characterizing and clustering RNA secondary structures without computational folding or alignment.
|
2025-03-25 |
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locarna
|
public |
LocARNA is a collection of alignment tools for the structural analysis of RNA.
|
2025-03-25 |
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phono3py
|
public |
A simulation package of phonon-phonon interaction related properties
|
2025-03-25 |
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circleator
|
public |
Flexible circular visualization of genome-associated data with BioPerl and SVG.
|
2025-03-25 |
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apache-batik
|
public |
Batik is a Java-based toolkit for applications or applets that want to use images in the Scalable Vector Graphics (SVG) format for various purposes, such as display, generation or manipulation.
|
2025-03-25 |
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gramdist
|
public |
GramDist is a utility for generating dissimilarity matrices using the relative complexity measure, a computationally efficient and alignment free evolutionary distance metric.
|
2025-03-25 |
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gramcluster
|
public |
GramCluster is a fast and accurate progressive clustering algorithm that relies on a grammar-based sequence distance and is particularly useful in clustering large datasets.
|
2025-03-25 |
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gramalign
|
public |
GramAlign is a time-efficient progressive Multiple Sequence Alignment (MSA) algorithm.
|
2025-03-25 |
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gradle
|
public |
Gradle is an open-source build automation tool focused on flexibility and performance.
|
2025-03-25 |
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gensim
|
public |
Topic Modelling for Humans
|
2025-03-25 |
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r-rhierbaps
|
public |
rhierbaps is R implementation of hierBAPS.
|
2025-03-25 |
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ncarg-rangs
|
public |
RANGS is the abbreviation of 'Regionally Accessible Nested Global Shorelines'.
|
2025-03-25 |
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bash-kernel
|
public |
A bash kernel for Jupyter
|
2025-03-25 |
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cellranger
|
public |
Cell Ranger is a set of analysis pipelines that process Chromium single-cell RNA-seq output to align reads, generate feature-barcode matrices and perform clustering and gene expression analysis.
|
2025-03-25 |
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bcl2fastq2
|
public |
The Illumina bcl2fastq2 Conversion Software v2.20 demultiplexes sequencing data and converts base call (BCL) files into FASTQ files.
|
2025-03-25 |
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sumo
|
public |
Heavy weight plotting tools for ab initio solid-state calculations.
|
2025-03-25 |
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python-ripser
|
public |
A Lean Persistent Homology Library for Python
|
2025-03-25 |
|
matlab-kernel
|
public |
Jupyter Kernel for Matlab
|
2025-03-25 |
|
persim
|
public |
Distances and representations of persistence diagrams
|
2025-03-25 |
