Structure refinement and validation for crystallography and single particle analysis
copied from cf-post-staging / servalcatStructure refinement and validation for crystallography and single particle analysis.
Servalcat implements pipelines that use Refmac5:
- servalcat refine_spa: cryo-EM SPA refinement pipeline
- servalcat refine_cx: small molecule crystallography
and a Refmac5 controller
- refmacat: behaves as Refmac, but uses GEMMI for restraint generation instead of MAKECIF
Now “No Refmac5” refinement programs have been actively developed:
- servalcat refine_geom: geometry optimization
- servalcat refine_spa_norefmac: "No Refmac" version of refine_spa
- servalcat refine_xtal_norefmac: crystallographic refinement
Also, it has several utility commands: servalcat util.
