Single-Cell Analysis in Python. Scales to >1M cells.

copied from cf-staging / scanpy


  • noarch v1.9.3

conda install

To install this package run one of the following:
conda install -c conda-forge scanpy


Scanpy is a scalable toolkit for analyzing single-cell gene expression data built jointly with anndata. It includes preprocessing, visualization, clustering, trajectory inference and differential expression testing. The Python-based implementation efficiently deals with datasets of more than one million cells.

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