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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

copied from cf-staging / r-vcfr
Type Size Name Uploaded Downloads Labels
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_1.conda  1 year and 8 months ago 692 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r43ha73a074_1.conda  1 year and 8 months ago 484 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42ha73a074_1.conda  1 year and 8 months ago 448 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r43h33b523d_1.conda  1 year and 8 months ago 1832 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r42h33b523d_1.conda  1 year and 8 months ago 1754 main
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_0.conda  2 years and 21 days ago 862 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r41h32f0767_0.conda  2 years and 21 days ago 463 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42h32f0767_0.conda  2 years and 21 days ago 454 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r41h58bca29_0.conda  2 years and 21 days ago 2573 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r42h58bca29_0.conda  2 years and 21 days ago 2090 main

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