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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

copied from cf-post-staging / r-vcfr
Type Size Name Uploaded Downloads Labels
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r44hbf875fd_2.conda  17 days and 5 hours ago 24 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r45hbf875fd_2.conda  17 days and 5 hours ago 23 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r44h68b42e3_2.conda  17 days and 5 hours ago 28 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r45h68b42e3_2.conda  17 days and 5 hours ago 30 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r44h6d565e7_2.conda  17 days and 5 hours ago 179 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r45h6d565e7_2.conda  17 days and 5 hours ago 5906 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r43hee0745d_1.conda  1 year and 2 months ago 517 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r44hee0745d_1.conda  1 year and 2 months ago 516 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r44hfba2881_1.conda  1 year and 2 months ago 453 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r43hfba2881_1.conda  1 year and 2 months ago 492 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r43h92ba465_1.conda  1 year and 2 months ago 2214 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r44h92ba465_1.conda  1 year and 2 months ago 7438 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r41h67098fc_0.conda  1 year and 9 months ago 609 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r42hd6ad0b9_0.conda  1 year and 9 months ago 506 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r43hd6ad0b9_0.conda  1 year and 9 months ago 550 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r43h33b523d_0.conda  1 year and 9 months ago 2726 main
conda 1.6 MB | linux-64/r-vcfr-1.15.0-r42h33b523d_0.conda  1 year and 9 months ago 2352 main
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_1.conda  2 years and 3 months ago 709 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r43ha73a074_1.conda  2 years and 3 months ago 496 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42ha73a074_1.conda  2 years and 3 months ago 457 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r43h33b523d_1.conda  2 years and 3 months ago 2298 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r42h33b523d_1.conda  2 years and 3 months ago 2214 main
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_0.conda  2 years and 7 months ago 877 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r41h32f0767_0.conda  2 years and 7 months ago 474 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42h32f0767_0.conda  2 years and 7 months ago 463 main

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