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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

copied from cf-post-staging / r-vcfr
Type Size Name Uploaded Downloads Labels
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r44hbf875fd_2.conda  18 days and 5 hours ago 29 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r45hbf875fd_2.conda  18 days and 5 hours ago 27 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r44h68b42e3_2.conda  18 days and 5 hours ago 29 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r45h68b42e3_2.conda  18 days and 5 hours ago 31 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r44h6d565e7_2.conda  18 days and 5 hours ago 188 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r45h6d565e7_2.conda  18 days and 6 hours ago 6060 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r43hee0745d_1.conda  1 year and 2 months ago 517 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r44hee0745d_1.conda  1 year and 2 months ago 516 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r44hfba2881_1.conda  1 year and 2 months ago 454 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r43hfba2881_1.conda  1 year and 2 months ago 493 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r43h92ba465_1.conda  1 year and 2 months ago 2219 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r44h92ba465_1.conda  1 year and 2 months ago 7440 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r41h67098fc_0.conda  1 year and 10 months ago 609 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r42hd6ad0b9_0.conda  1 year and 10 months ago 507 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r43hd6ad0b9_0.conda  1 year and 10 months ago 551 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r43h33b523d_0.conda  1 year and 10 months ago 2730 main
conda 1.6 MB | linux-64/r-vcfr-1.15.0-r42h33b523d_0.conda  1 year and 10 months ago 2354 main
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_1.conda  2 years and 3 months ago 709 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r43ha73a074_1.conda  2 years and 3 months ago 497 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42ha73a074_1.conda  2 years and 3 months ago 458 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r43h33b523d_1.conda  2 years and 3 months ago 2300 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r42h33b523d_1.conda  2 years and 3 months ago 2217 main
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_0.conda  2 years and 7 months ago 877 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r41h32f0767_0.conda  2 years and 7 months ago 475 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42h32f0767_0.conda  2 years and 7 months ago 464 main

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