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conda-forge / packages / r-ruv

Implements the 'RUV' (Remove Unwanted Variation) algorithms. These algorithms attempt to adjust for systematic errors of unknown origin in high-dimensional data. The algorithms were originally developed for use with genomic data, especially microarray data, but may be useful with other types of high-dimensional data as well. These algorithms were proposed in Gagnon-Bartsch and Speed (2012) <doi:10.1093/nar/gkz433>, Gagnon-Bartsch, Jacob and Speed (2013), and Molania, et. al. (2019) <doi:10.1093/nar/gkz433>. The algorithms require the user to specify a set of negative control variables, as described in the references. The algorithms included in this package are 'RUV-2', 'RUV-4', 'RUV-inv', 'RUV-rinv', 'RUV-I', and RUV-III', along with various supporting algorithms.

copied from cf-staging / r-ruv

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Type Size Name Uploaded Downloads Labels
conda 299.9 kB | win-64/r-ruv-0.9.7.1-r44h11b023d_4.conda  8 months and 14 days ago 289 main
conda 296.4 kB | win-64/r-ruv-0.9.7.1-r43h11b023d_4.conda  8 months and 14 days ago 306 main
conda 297.7 kB | linux-ppc64le/r-ruv-0.9.7.1-r43h131bcff_4.conda  8 months and 14 days ago 130 main
conda 301.1 kB | linux-ppc64le/r-ruv-0.9.7.1-r44h131bcff_4.conda  8 months and 14 days ago 129 main
conda 298.2 kB | osx-64/r-ruv-0.9.7.1-r44h6b9d099_4.conda  8 months and 14 days ago 220 main
conda 295.2 kB | osx-64/r-ruv-0.9.7.1-r43h6b9d099_4.conda  8 months and 14 days ago 249 main
conda 296.1 kB | linux-aarch64/r-ruv-0.9.7.1-r43hf571b26_4.conda  8 months and 14 days ago 146 main
conda 299.1 kB | linux-aarch64/r-ruv-0.9.7.1-r44hf571b26_4.conda  8 months and 14 days ago 157 main
conda 297.5 kB | linux-64/r-ruv-0.9.7.1-r44hdb488b9_4.conda  8 months and 14 days ago 966 main
conda 294.7 kB | linux-64/r-ruv-0.9.7.1-r43hdb488b9_4.conda  8 months and 14 days ago 1147 main
conda 294.3 kB | osx-64/r-ruv-0.9.7.1-r43hb2c329c_3.conda  1 year and 5 months ago 248 main
conda 297.5 kB | linux-ppc64le/r-ruv-0.9.7.1-r43h9da1b96_3.conda  1 year and 5 months ago 133 main
conda 295.5 kB | osx-64/r-ruv-0.9.7.1-r42hb2c329c_3.conda  1 year and 5 months ago 258 main
conda 298.6 kB | linux-ppc64le/r-ruv-0.9.7.1-r42h9da1b96_3.conda  1 year and 5 months ago 139 main
conda 295.0 kB | linux-aarch64/r-ruv-0.9.7.1-r43h9d23599_3.conda  1 year and 5 months ago 132 main
conda 296.2 kB | linux-aarch64/r-ruv-0.9.7.1-r42h9d23599_3.conda  1 year and 5 months ago 137 main
conda 297.8 kB | win-64/r-ruv-0.9.7.1-r41h6d2157b_3.conda  1 year and 9 months ago 508 main
conda 295.0 kB | osx-64/r-ruv-0.9.7.1-r43h6dc245f_3.conda  1 year and 9 months ago 265 main
conda 295.6 kB | osx-64/r-ruv-0.9.7.1-r42h6dc245f_3.conda  1 year and 9 months ago 277 main
conda 293.9 kB | linux-64/r-ruv-0.9.7.1-r43h57805ef_3.conda  1 year and 9 months ago 1700 main
conda 294.6 kB | linux-64/r-ruv-0.9.7.1-r42h57805ef_3.conda  1 year and 9 months ago 1813 main
conda 307.6 kB | win-64/r-ruv-0.9.7.1-r41h6d2157b_2.tar.bz2  2 years and 5 months ago 546 main
conda 305.1 kB | osx-64/r-ruv-0.9.7.1-r42h815d134_2.tar.bz2  2 years and 5 months ago 109 main
conda 304.8 kB | osx-64/r-ruv-0.9.7.1-r41h815d134_2.tar.bz2  2 years and 5 months ago 92 main
conda 303.9 kB | linux-64/r-ruv-0.9.7.1-r42h06615bd_2.tar.bz2  2 years and 5 months ago 2070 main
conda 303.6 kB | linux-64/r-ruv-0.9.7.1-r41h06615bd_2.tar.bz2  2 years and 5 months ago 1946 main
conda 324.2 kB | win-64/r-ruv-0.9.7.1-r40h6d2157b_1.tar.bz2  3 years and 10 months ago 805 main
conda 305.9 kB | win-64/r-ruv-0.9.7.1-r41h6d2157b_1.tar.bz2  3 years and 10 months ago 801 main
conda 302.6 kB | osx-64/r-ruv-0.9.7.1-r41h28b5c78_1.tar.bz2  3 years and 10 months ago 191 main
conda 302.5 kB | osx-64/r-ruv-0.9.7.1-r40h28b5c78_1.tar.bz2  3 years and 10 months ago 159 main
conda 302.9 kB | linux-64/r-ruv-0.9.7.1-r41hcfec24a_1.tar.bz2  3 years and 10 months ago 2633 main
conda 303.1 kB | linux-64/r-ruv-0.9.7.1-r40hcfec24a_1.tar.bz2  3 years and 10 months ago 2480 main
conda 322.5 kB | win-64/r-ruv-0.9.7.1-r40hda5aaf8_1.tar.bz2  4 years and 10 months ago 1043 main
conda 325.1 kB | win-64/r-ruv-0.9.7.1-r36hda5aaf8_1.tar.bz2  4 years and 10 months ago 1049 main
conda 302.0 kB | osx-64/r-ruv-0.9.7.1-r40h17f1fa6_1.tar.bz2  4 years and 10 months ago 358 main
conda 303.6 kB | osx-64/r-ruv-0.9.7.1-r36h17f1fa6_1.tar.bz2  4 years and 10 months ago 349 main
conda 302.0 kB | linux-64/r-ruv-0.9.7.1-r40hcdcec82_1.tar.bz2  4 years and 10 months ago 3345 main
conda 304.1 kB | linux-64/r-ruv-0.9.7.1-r36hcdcec82_1.tar.bz2  4 years and 10 months ago 3334 main
conda 325.1 kB | win-64/r-ruv-0.9.7.1-r36hda5aaf8_0.tar.bz2  5 years and 6 months ago 1334 main cf202003
conda 320.7 kB | win-64/r-ruv-0.9.7.1-r35hda5aaf8_0.tar.bz2  5 years and 6 months ago 1270 main cf202003
conda 299.6 kB | osx-64/r-ruv-0.9.7.1-r35h159158b_0.tar.bz2  5 years and 6 months ago 363 main cf202003
conda 302.6 kB | osx-64/r-ruv-0.9.7.1-r36h159158b_0.tar.bz2  5 years and 6 months ago 357 main cf202003
conda 303.3 kB | linux-64/r-ruv-0.9.7.1-r36hcdcec82_0.tar.bz2  5 years and 6 months ago 3762 main cf202003
conda 300.4 kB | linux-64/r-ruv-0.9.7.1-r35hcdcec82_0.tar.bz2  5 years and 6 months ago 3671 main cf202003
conda 318.9 kB | win-64/r-ruv-0.9.7-r35hda5aaf8_1.tar.bz2  5 years and 8 months ago 1367 main cf202003
conda 323.8 kB | win-64/r-ruv-0.9.7-r36hda5aaf8_1.tar.bz2  5 years and 8 months ago 1375 main cf202003
conda 299.1 kB | osx-64/r-ruv-0.9.7-r35h159158b_1.tar.bz2  5 years and 8 months ago 368 main cf202003
conda 302.2 kB | osx-64/r-ruv-0.9.7-r36h159158b_1.tar.bz2  5 years and 8 months ago 365 main cf202003
conda 303.2 kB | linux-64/r-ruv-0.9.7-r36hcdcec82_1.tar.bz2  5 years and 8 months ago 3961 main cf202003
conda 300.0 kB | linux-64/r-ruv-0.9.7-r35hcdcec82_1.tar.bz2  5 years and 8 months ago 3900 main cf202003
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