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A toolkit for working with Biological Observation Matrix ('BIOM') files. Features include reading/writing all 'BIOM' formats, rarefaction, alpha diversity, beta diversity (including 'UniFrac'), summarizing counts by taxonomic level, and sample subsetting. Standalone functions for reading, writing, and subsetting phylogenetic trees are also provided. All CPU intensive operations are encoded in C with multi-thread support.

copied from cf-staging / r-rbiom
Type Size Name Uploaded Downloads Labels
conda 313.5 kB | osx-64/r-rbiom-1.0.3-r40h9951f98_0.tar.bz2  3 years and 5 months ago 97 main
conda 345.0 kB | linux-64/r-rbiom-1.0.3-r40h03ef668_0.tar.bz2  3 years and 5 months ago 2437 main
conda 345.2 kB | linux-64/r-rbiom-1.0.3-r41h03ef668_0.tar.bz2  3 years and 5 months ago 2307 main
conda 352.5 kB | win-64/r-rbiom-1.0.2-r40ha856d6a_0.tar.bz2  3 years and 6 months ago 728 main
conda 341.8 kB | win-64/r-rbiom-1.0.2-r41ha856d6a_0.tar.bz2  3 years and 6 months ago 751 main
conda 313.2 kB | osx-64/r-rbiom-1.0.2-r40h9951f98_0.tar.bz2  3 years and 6 months ago 92 main
conda 313.2 kB | osx-64/r-rbiom-1.0.2-r41h9951f98_0.tar.bz2  3 years and 6 months ago 94 main
conda 344.8 kB | linux-64/r-rbiom-1.0.2-r40h03ef668_0.tar.bz2  3 years and 6 months ago 2340 main
conda 344.9 kB | linux-64/r-rbiom-1.0.2-r41h03ef668_0.tar.bz2  3 years and 6 months ago 2334 main

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