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A toolkit for working with Biological Observation Matrix ('BIOM') files. Features include reading/writing all 'BIOM' formats, rarefaction, alpha diversity, beta diversity (including 'UniFrac'), summarizing counts by taxonomic level, and sample subsetting. Standalone functions for reading, writing, and subsetting phylogenetic trees are also provided. All CPU intensive operations are encoded in C with multi-thread support.

copied from cf-staging / r-rbiom
Type Size Name Uploaded Downloads Labels
conda 1.6 MB | osx-64/r-rbiom-2.2.0-r44h2711daa_0.conda  18 days and 12 minutes ago 29 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.0-r43h31118f2_0.conda  18 days and 13 minutes ago 25 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.0-r44h31118f2_0.conda  18 days and 13 minutes ago 26 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.0-r43h21d2c02_0.conda  18 days and 13 minutes ago 21 main
conda 1.6 MB | osx-64/r-rbiom-2.2.0-r43h2711daa_0.conda  18 days and 14 minutes ago 20 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.0-r44h8455397_0.conda  18 days and 15 minutes ago 11 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.0-r43h8455397_0.conda  18 days and 15 minutes ago 10 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.0-r44h21d2c02_0.conda  18 days and 15 minutes ago 26 main
conda 1.6 MB | linux-64/r-rbiom-2.2.0-r44h93ab643_0.conda  18 days and 16 minutes ago 375 main
conda 1.6 MB | linux-64/r-rbiom-2.2.0-r43h93ab643_0.conda  18 days and 16 minutes ago 165 main
conda 1.6 MB | osx-arm64/r-rbiom-2.1.2-r44h31118f2_0.conda  1 month and 3 days ago 29 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.1.2-r44h21d2c02_0.conda  1 month and 3 days ago 22 main
conda 1.6 MB | osx-64/r-rbiom-2.1.2-r43h2711daa_0.conda  1 month and 3 days ago 27 main
conda 1.6 MB | osx-arm64/r-rbiom-2.1.2-r43h31118f2_0.conda  1 month and 3 days ago 22 main
conda 1.6 MB | osx-64/r-rbiom-2.1.2-r44h2711daa_0.conda  1 month and 3 days ago 32 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.1.2-r43h21d2c02_0.conda  1 month and 3 days ago 21 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.1.2-r44h8455397_0.conda  1 month and 3 days ago 12 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.1.2-r43h8455397_0.conda  1 month and 3 days ago 12 main
conda 1.6 MB | linux-64/r-rbiom-2.1.2-r43h93ab643_0.conda  1 month and 3 days ago 205 main
conda 1.6 MB | linux-64/r-rbiom-2.1.2-r44h93ab643_0.conda  1 month and 3 days ago 331 main
conda 1.6 MB | osx-arm64/r-rbiom-2.1.1-r44h31118f2_0.conda  1 month and 11 days ago 26 main
conda 1.6 MB | osx-arm64/r-rbiom-2.1.1-r43h31118f2_0.conda  1 month and 11 days ago 25 main
conda 1.6 MB | osx-64/r-rbiom-2.1.1-r44h2711daa_0.conda  1 month and 11 days ago 27 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.1.1-r44h8455397_0.conda  1 month and 11 days ago 10 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.1.1-r44h21d2c02_0.conda  1 month and 11 days ago 24 main

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