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A toolkit for working with Biological Observation Matrix ('BIOM') files. Features include reading/writing all 'BIOM' formats, rarefaction, alpha diversity, beta diversity (including 'UniFrac'), summarizing counts by taxonomic level, and sample subsetting. Standalone functions for reading, writing, and subsetting phylogenetic trees are also provided. All CPU intensive operations are encoded in C with multi-thread support.

copied from cf-post-staging / r-rbiom
Type Size Name Uploaded Downloads Labels
conda 1.5 MB | osx-arm64/r-rbiom-2.2.1-r43h31118f2_0.conda  2 months and 17 hours ago 28 main
conda 1.5 MB | osx-64/r-rbiom-2.2.1-r43h2711daa_0.conda  2 months and 17 hours ago 30 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r44h31118f2_0.conda  2 months and 17 hours ago 57 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r44h2711daa_0.conda  2 months and 17 hours ago 49 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.1-r44h8455397_0.conda  2 months and 17 hours ago 18 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r44h21d2c02_0.conda  2 months and 17 hours ago 54 main
conda 1.5 MB | linux-aarch64/r-rbiom-2.2.1-r43h21d2c02_0.conda  2 months and 17 hours ago 37 main
conda 1.5 MB | linux-ppc64le/r-rbiom-2.2.1-r43h8455397_0.conda  2 months and 17 hours ago 17 main
conda 1.5 MB | linux-64/r-rbiom-2.2.1-r43h93ab643_0.conda  2 months and 17 hours ago 376 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r44h93ab643_0.conda  2 months and 17 hours ago 1147 main

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