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A toolkit for working with Biological Observation Matrix ('BIOM') files. Features include reading/writing all 'BIOM' formats, rarefaction, alpha diversity, beta diversity (including 'UniFrac'), summarizing counts by taxonomic level, and sample subsetting. Standalone functions for reading, writing, and subsetting phylogenetic trees are also provided. All CPU intensive operations are encoded in C with multi-thread support.

copied from cf-post-staging / r-rbiom
Type Size Name Uploaded Downloads Labels
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r45hc1cd577_1.conda  3 months and 15 days ago 57 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r44hc1cd577_1.conda  3 months and 15 days ago 164 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r44ha730edb_1.conda  3 months and 15 days ago 97 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r45ha730edb_1.conda  3 months and 15 days ago 63 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r44h08b74da_1.conda  3 months and 15 days ago 74 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.1-r44hb6fba7b_1.conda  3 months and 15 days ago 28 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r45h08b74da_1.conda  3 months and 15 days ago 58 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r44h3697838_1.conda  3 months and 15 days ago 1972 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r45h3697838_1.conda  3 months and 15 days ago 296 main
conda 1.5 MB | osx-arm64/r-rbiom-2.2.1-r43h31118f2_0.conda  6 months and 13 days ago 59 main
conda 1.5 MB | osx-64/r-rbiom-2.2.1-r43h2711daa_0.conda  6 months and 13 days ago 61 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r44h31118f2_0.conda  6 months and 13 days ago 113 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r44h2711daa_0.conda  6 months and 13 days ago 83 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.1-r44h8455397_0.conda  6 months and 13 days ago 30 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r44h21d2c02_0.conda  6 months and 13 days ago 95 main
conda 1.5 MB | linux-aarch64/r-rbiom-2.2.1-r43h21d2c02_0.conda  6 months and 13 days ago 81 main
conda 1.5 MB | linux-ppc64le/r-rbiom-2.2.1-r43h8455397_0.conda  6 months and 13 days ago 29 main
conda 1.5 MB | linux-64/r-rbiom-2.2.1-r43h93ab643_0.conda  6 months and 13 days ago 1178 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r44h93ab643_0.conda  6 months and 13 days ago 1871 main

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