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PHATE is a tool for visualizing high dimensional single-cell data with natural progressions or trajectories. PHATE uses a novel conceptual framework for learning and visualizing the manifold inherent to biological systems in which smooth transitions mark the progressions of cells from one state to another. To see how PHATE can be applied to single-cell RNA-seq datasets from hematopoietic stem cells, human embryonic stem cells, and bone marrow samples, check out our publication in Nature Biotechnology at <doi:10.1038/s41587-019-0336-3>.

copied from cf-staging / r-phater
Type Size Name Uploaded Downloads Labels
conda 3.6 MB | noarch/r-phater-1.0.7-r43hc72bb7e_3.conda  7 months and 25 days ago 638 main
conda 3.6 MB | noarch/r-phater-1.0.7-r44hc72bb7e_3.conda  7 months and 25 days ago 667 main
conda 3.6 MB | noarch/r-phater-1.0.7-r42hc72bb7e_2.conda  1 year and 8 months ago 1113 main
conda 3.6 MB | noarch/r-phater-1.0.7-r43hc72bb7e_2.conda  1 year and 8 months ago 1154 main
conda 3.7 MB | noarch/r-phater-1.0.7-r41hc72bb7e_1.tar.bz2  2 years and 5 months ago 1488 main
conda 3.7 MB | noarch/r-phater-1.0.7-r42hc72bb7e_1.tar.bz2  2 years and 5 months ago 1469 main
conda 3.7 MB | noarch/r-phater-1.0.7-r41hc72bb7e_0.tar.bz2  3 years and 9 months ago 2167 main
conda 3.7 MB | noarch/r-phater-1.0.7-r36hc72bb7e_0.tar.bz2  4 years and 1 month ago 2459 main
conda 3.7 MB | noarch/r-phater-1.0.7-r40hc72bb7e_0.tar.bz2  4 years and 1 month ago 2464 main
conda 3.8 MB | noarch/r-phater-1.0.4-r36h6115d3f_0.tar.bz2  4 years and 9 months ago 2958 main
conda 3.8 MB | noarch/r-phater-1.0.4-r40h6115d3f_0.tar.bz2  4 years and 9 months ago 2968 main
conda 3.9 MB | noarch/r-phater-1.0.0-r40h6115d3f_1.tar.bz2  4 years and 10 months ago 2963 main
conda 3.9 MB | noarch/r-phater-1.0.0-r36h6115d3f_1.tar.bz2  4 years and 10 months ago 2982 main
conda 3.8 MB | noarch/r-phater-1.0.0-r35h6115d3f_0.tar.bz2  4 years and 10 months ago 2988 main
conda 3.8 MB | noarch/r-phater-1.0.0-r36h6115d3f_0.tar.bz2  4 years and 10 months ago 3005 main

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