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PHATE is a tool for visualizing high dimensional single-cell data with natural progressions or trajectories. PHATE uses a novel conceptual framework for learning and visualizing the manifold inherent to biological systems in which smooth transitions mark the progressions of cells from one state to another. To see how PHATE can be applied to single-cell RNA-seq datasets from hematopoietic stem cells, human embryonic stem cells, and bone marrow samples, check out our publication in Nature Biotechnology at <doi:10.1038/s41587-019-0336-3>.

copied from cf-staging / r-phater
Type Size Name Uploaded Downloads Labels
conda 3.6 MB | noarch/r-phater-1.0.7-r43hc72bb7e_3.conda  6 months and 5 days ago 503 main
conda 3.6 MB | noarch/r-phater-1.0.7-r44hc72bb7e_3.conda  6 months and 5 days ago 517 main
conda 3.6 MB | noarch/r-phater-1.0.7-r42hc72bb7e_2.conda  1 year and 7 months ago 968 main
conda 3.6 MB | noarch/r-phater-1.0.7-r43hc72bb7e_2.conda  1 year and 7 months ago 1027 main
conda 3.7 MB | noarch/r-phater-1.0.7-r41hc72bb7e_1.tar.bz2  2 years and 3 months ago 1401 main
conda 3.7 MB | noarch/r-phater-1.0.7-r42hc72bb7e_1.tar.bz2  2 years and 3 months ago 1379 main
conda 3.7 MB | noarch/r-phater-1.0.7-r41hc72bb7e_0.tar.bz2  3 years and 7 months ago 2080 main
conda 3.7 MB | noarch/r-phater-1.0.7-r36hc72bb7e_0.tar.bz2  3 years and 11 months ago 2370 main
conda 3.7 MB | noarch/r-phater-1.0.7-r40hc72bb7e_0.tar.bz2  3 years and 11 months ago 2375 main

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