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Functions for reading, writing, plotting, analysing, and manipulating allelic and haplotypic data, including from VCF files, and for the analysis of population nucleotide sequences and micro-satellites including coalescent analyses, linkage disequilibrium, population structure (Fst, Amova) and equilibrium (HWE), haplotype networks, minimum spanning tree and network, and median-joining networks.

copied from cf-staging / r-pegas
Type Size Name Uploaded Downloads Labels
conda 841.0 kB | win-64/r-pegas-1.3-r44h11b023d_1.conda  5 months and 25 days ago 281 main
conda 834.2 kB | win-64/r-pegas-1.3-r43h11b023d_1.conda  5 months and 25 days ago 283 main
conda 832.8 kB | osx-64/r-pegas-1.3-r43h199b6f9_1.conda  5 months and 25 days ago 242 main
conda 841.9 kB | osx-64/r-pegas-1.3-r44h199b6f9_1.conda  5 months and 25 days ago 211 main
conda 833.6 kB | linux-64/r-pegas-1.3-r43h2b5f3a1_1.conda  5 months and 25 days ago 722 main
conda 841.2 kB | linux-64/r-pegas-1.3-r44h2b5f3a1_1.conda  5 months and 25 days ago 733 main
conda 835.0 kB | win-64/r-pegas-1.3-r41h6d2157b_0.conda  1 year and 3 months ago 555 main
conda 832.6 kB | osx-64/r-pegas-1.3-r43hb2c329c_0.conda  1 year and 3 months ago 418 main
conda 834.2 kB | osx-64/r-pegas-1.3-r42hb2c329c_0.conda  1 year and 3 months ago 449 main
conda 833.8 kB | linux-64/r-pegas-1.3-r43h57805ef_0.conda  1 year and 3 months ago 1598 main
conda 834.0 kB | linux-64/r-pegas-1.3-r42h57805ef_0.conda  1 year and 3 months ago 1650 main
conda 833.1 kB | win-64/r-pegas-1.2-r41h6d2157b_1.conda  1 year and 9 months ago 654 main
conda 830.1 kB | osx-64/r-pegas-1.2-r43h6dc245f_1.conda  1 year and 9 months ago 428 main
conda 832.5 kB | osx-64/r-pegas-1.2-r42h6dc245f_1.conda  1 year and 9 months ago 407 main
conda 831.7 kB | linux-64/r-pegas-1.2-r42h57805ef_1.conda  1 year and 9 months ago 1675 main
conda 830.4 kB | linux-64/r-pegas-1.2-r43h57805ef_1.conda  1 year and 9 months ago 1703 main
conda 831.9 kB | win-64/r-pegas-1.2-r41h6d2157b_0.conda  2 years and 1 month ago 741 main
conda 830.8 kB | osx-64/r-pegas-1.2-r41h815d134_0.conda  2 years and 1 month ago 390 main
conda 831.7 kB | osx-64/r-pegas-1.2-r42h815d134_0.conda  2 years and 1 month ago 412 main
conda 831.0 kB | linux-64/r-pegas-1.2-r41h133d619_0.conda  2 years and 1 month ago 2191 main
conda 831.6 kB | linux-64/r-pegas-1.2-r42h133d619_0.conda  2 years and 1 month ago 1964 main
conda 1.0 MB | win-64/r-pegas-1.1-r41h6d2157b_1.tar.bz2  2 years and 5 months ago 551 main
conda 1.0 MB | osx-64/r-pegas-1.1-r41h815d134_1.tar.bz2  2 years and 5 months ago 77 main
conda 1.0 MB | osx-64/r-pegas-1.1-r42h815d134_1.tar.bz2  2 years and 5 months ago 79 main
conda 1.0 MB | linux-64/r-pegas-1.1-r41h06615bd_1.tar.bz2  2 years and 5 months ago 1850 main
conda 1.0 MB | linux-64/r-pegas-1.1-r42h06615bd_1.tar.bz2  2 years and 5 months ago 1893 main
conda 1.0 MB | win-64/r-pegas-1.1-r40h6d2157b_0.tar.bz2  3 years and 3 months ago 710 main
conda 1.0 MB | win-64/r-pegas-1.1-r41h6d2157b_0.tar.bz2  3 years and 3 months ago 722 main
conda 1.0 MB | osx-64/r-pegas-1.1-r40h28b5c78_0.tar.bz2  3 years and 3 months ago 86 main
conda 1.0 MB | osx-64/r-pegas-1.1-r41h28b5c78_0.tar.bz2  3 years and 3 months ago 81 main
conda 1.0 MB | linux-64/r-pegas-1.1-r40hcfec24a_0.tar.bz2  3 years and 3 months ago 2283 main
conda 1.0 MB | linux-64/r-pegas-1.1-r41hcfec24a_0.tar.bz2  3 years and 3 months ago 2205 main
conda 1.0 MB | win-64/r-pegas-1.0_1-r41h6d2157b_0.tar.bz2  3 years and 10 months ago 792 main
conda 1.0 MB | osx-64/r-pegas-1.0_1-r41h28b5c78_0.tar.bz2  3 years and 10 months ago 172 main
conda 1.0 MB | linux-64/r-pegas-1.0_1-r41hcfec24a_0.tar.bz2  3 years and 10 months ago 2492 main
conda 1.0 MB | win-64/r-pegas-1.0_1-r36h6d2157b_0.tar.bz2  3 years and 10 months ago 787 main
conda 1.0 MB | win-64/r-pegas-1.0_1-r40h6d2157b_0.tar.bz2  3 years and 10 months ago 792 main
conda 1.0 MB | osx-64/r-pegas-1.0_1-r36h28b5c78_0.tar.bz2  3 years and 10 months ago 148 main
conda 1.0 MB | osx-64/r-pegas-1.0_1-r40h28b5c78_0.tar.bz2  3 years and 10 months ago 155 main
conda 1.0 MB | linux-64/r-pegas-1.0_1-r40hcfec24a_0.tar.bz2  3 years and 10 months ago 2500 main
conda 1.0 MB | linux-64/r-pegas-1.0_1-r36hcfec24a_0.tar.bz2  3 years and 10 months ago 2485 main
conda 1.0 MB | osx-64/r-pegas-1.0-r36h28b5c78_0.tar.bz2  3 years and 11 months ago 182 main
conda 1.0 MB | win-64/r-pegas-1.0-r36h6d2157b_0.tar.bz2  3 years and 11 months ago 839 main
conda 1.0 MB | win-64/r-pegas-1.0-r40h6d2157b_0.tar.bz2  3 years and 11 months ago 899 main
conda 1.0 MB | osx-64/r-pegas-1.0-r40h28b5c78_0.tar.bz2  3 years and 11 months ago 231 main
conda 1.0 MB | linux-64/r-pegas-1.0-r40hcfec24a_0.tar.bz2  3 years and 11 months ago 2642 main
conda 1.0 MB | linux-64/r-pegas-1.0-r36hcfec24a_0.tar.bz2  3 years and 11 months ago 2580 main
conda 787.9 kB | win-64/r-pegas-0.14-r40hda5aaf8_0.tar.bz2  4 years and 6 months ago 997 main
conda 790.8 kB | win-64/r-pegas-0.14-r36hda5aaf8_0.tar.bz2  4 years and 6 months ago 1008 main
conda 744.2 kB | osx-64/r-pegas-0.14-r40h800e0f2_0.tar.bz2  4 years and 6 months ago 315 main

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