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A fast parallelized alternative to R's native 'dist' function to calculate distance matrices for continuous, binary, and multi-dimensional input matrices, which supports a broad variety of 41 predefined distance functions from the 'stats', 'proxy' and 'dtw' R packages, as well as user- defined functions written in C++. For ease of use, the 'parDist' function extends the signature of the 'dist' function and uses the same parameter naming conventions as distance methods of existing R packages. The package is mainly implemented in C++ and leverages the 'RcppParallel' package to parallelize the distance computations with the help of the 'TinyThread' library. Furthermore, the 'Armadillo' linear algebra library is used for optimized matrix operations during distance calculations. The curiously recurring template pattern (CRTP) technique is applied to avoid virtual functions, which improves the Dynamic Time Warping calculations while the implementation stays flexible enough to support different DTW step patterns and normalization methods.

copied from cf-staging / r-paralleldist
Type Size Name Uploaded Downloads Labels
conda 315.0 kB | win-64/r-paralleldist-0.2.6-r44h3dc9324_3.conda  4 months and 14 days ago 111 main
conda 312.3 kB | win-64/r-paralleldist-0.2.6-r43h3dc9324_3.conda  4 months and 14 days ago 104 main
conda 319.1 kB | osx-64/r-paralleldist-0.2.6-r43haa2a3db_3.conda  4 months and 14 days ago 119 main
conda 322.1 kB | osx-64/r-paralleldist-0.2.6-r44haa2a3db_3.conda  4 months and 14 days ago 100 main
conda 349.5 kB | linux-ppc64le/r-paralleldist-0.2.6-r44h69b9914_3.conda  4 months and 14 days ago 44 main
conda 346.6 kB | linux-ppc64le/r-paralleldist-0.2.6-r43h69b9914_3.conda  4 months and 14 days ago 41 main
conda 337.0 kB | linux-aarch64/r-paralleldist-0.2.6-r43h9eb5c89_3.conda  4 months and 14 days ago 60 main
conda 340.0 kB | linux-aarch64/r-paralleldist-0.2.6-r44h9eb5c89_3.conda  4 months and 14 days ago 60 main
conda 337.2 kB | linux-64/r-paralleldist-0.2.6-r44hb79369c_3.conda  4 months and 14 days ago 574 main
conda 335.4 kB | linux-64/r-paralleldist-0.2.6-r43hb79369c_3.conda  4 months and 14 days ago 663 main
conda 338.0 kB | linux-ppc64le/r-paralleldist-0.2.6-r43hd301276_2.conda  1 year and 4 months ago 43 main
conda 336.8 kB | linux-ppc64le/r-paralleldist-0.2.6-r42hd301276_2.conda  1 year and 4 months ago 64 main
conda 325.8 kB | linux-aarch64/r-paralleldist-0.2.6-r43ha6e910b_2.conda  1 year and 4 months ago 75 main
conda 325.9 kB | linux-aarch64/r-paralleldist-0.2.6-r42ha6e910b_2.conda  1 year and 4 months ago 77 main
conda 309.5 kB | win-64/r-paralleldist-0.2.6-r41ha856d6a_2.conda  1 year and 6 months ago 364 main
conda 310.7 kB | osx-64/r-paralleldist-0.2.6-r43hac7d2d5_2.conda  1 year and 6 months ago 173 main
conda 310.8 kB | osx-64/r-paralleldist-0.2.6-r42hac7d2d5_2.conda  1 year and 6 months ago 167 main
conda 324.2 kB | linux-64/r-paralleldist-0.2.6-r43ha503ecb_2.conda  1 year and 6 months ago 1893 main
conda 323.8 kB | linux-64/r-paralleldist-0.2.6-r42ha503ecb_2.conda  1 year and 6 months ago 1555 main
conda 352.4 kB | win-64/r-paralleldist-0.2.6-r41ha856d6a_1.tar.bz2  2 years and 2 months ago 541 main
conda 353.9 kB | osx-64/r-paralleldist-0.2.6-r41h49197e3_1.tar.bz2  2 years and 2 months ago 73 main
conda 353.8 kB | osx-64/r-paralleldist-0.2.6-r42h49197e3_1.tar.bz2  2 years and 2 months ago 87 main
conda 363.0 kB | linux-64/r-paralleldist-0.2.6-r41h7525677_1.tar.bz2  2 years and 2 months ago 1685 main
conda 362.9 kB | linux-64/r-paralleldist-0.2.6-r42h7525677_1.tar.bz2  2 years and 2 months ago 1980 main
conda 359.7 kB | win-64/r-paralleldist-0.2.6-r40ha856d6a_0.tar.bz2  2 years and 11 months ago 711 main
conda 355.3 kB | win-64/r-paralleldist-0.2.6-r41ha856d6a_0.tar.bz2  2 years and 11 months ago 708 main
conda 344.2 kB | osx-64/r-paralleldist-0.2.6-r41h9951f98_0.tar.bz2  2 years and 11 months ago 89 main
conda 344.1 kB | osx-64/r-paralleldist-0.2.6-r40h9951f98_0.tar.bz2  2 years and 11 months ago 80 main
conda 376.5 kB | linux-64/r-paralleldist-0.2.6-r40h03ef668_0.tar.bz2  2 years and 11 months ago 1990 main
conda 376.6 kB | linux-64/r-paralleldist-0.2.6-r41h03ef668_0.tar.bz2  2 years and 11 months ago 2131 main

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