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A fast parallelized alternative to R's native 'dist' function to calculate distance matrices for continuous, binary, and multi-dimensional input matrices, which supports a broad variety of 41 predefined distance functions from the 'stats', 'proxy' and 'dtw' R packages, as well as user- defined functions written in C++. For ease of use, the 'parDist' function extends the signature of the 'dist' function and uses the same parameter naming conventions as distance methods of existing R packages. The package is mainly implemented in C++ and leverages the 'RcppParallel' package to parallelize the distance computations with the help of the 'TinyThread' library. Furthermore, the 'Armadillo' linear algebra library is used for optimized matrix operations during distance calculations. The curiously recurring template pattern (CRTP) technique is applied to avoid virtual functions, which improves the Dynamic Time Warping calculations while the implementation stays flexible enough to support different DTW step patterns and normalization methods.

copied from cf-staging / r-paralleldist
Type Size Name Uploaded Downloads Labels
conda 315.0 kB | win-64/r-paralleldist-0.2.6-r44h3dc9324_3.conda  4 months and 30 days ago 115 main
conda 312.3 kB | win-64/r-paralleldist-0.2.6-r43h3dc9324_3.conda  4 months and 30 days ago 108 main
conda 319.1 kB | osx-64/r-paralleldist-0.2.6-r43haa2a3db_3.conda  4 months and 30 days ago 121 main
conda 322.1 kB | osx-64/r-paralleldist-0.2.6-r44haa2a3db_3.conda  4 months and 30 days ago 100 main
conda 349.5 kB | linux-ppc64le/r-paralleldist-0.2.6-r44h69b9914_3.conda  4 months and 30 days ago 45 main
conda 346.6 kB | linux-ppc64le/r-paralleldist-0.2.6-r43h69b9914_3.conda  4 months and 30 days ago 42 main
conda 337.0 kB | linux-aarch64/r-paralleldist-0.2.6-r43h9eb5c89_3.conda  4 months and 30 days ago 63 main
conda 340.0 kB | linux-aarch64/r-paralleldist-0.2.6-r44h9eb5c89_3.conda  4 months and 30 days ago 62 main
conda 337.2 kB | linux-64/r-paralleldist-0.2.6-r44hb79369c_3.conda  4 months and 30 days ago 637 main
conda 335.4 kB | linux-64/r-paralleldist-0.2.6-r43hb79369c_3.conda  4 months and 30 days ago 732 main
conda 338.0 kB | linux-ppc64le/r-paralleldist-0.2.6-r43hd301276_2.conda  1 year and 4 months ago 44 main
conda 336.8 kB | linux-ppc64le/r-paralleldist-0.2.6-r42hd301276_2.conda  1 year and 4 months ago 65 main
conda 325.8 kB | linux-aarch64/r-paralleldist-0.2.6-r43ha6e910b_2.conda  1 year and 4 months ago 76 main
conda 325.9 kB | linux-aarch64/r-paralleldist-0.2.6-r42ha6e910b_2.conda  1 year and 4 months ago 78 main
conda 309.5 kB | win-64/r-paralleldist-0.2.6-r41ha856d6a_2.conda  1 year and 7 months ago 368 main
conda 310.7 kB | osx-64/r-paralleldist-0.2.6-r43hac7d2d5_2.conda  1 year and 7 months ago 174 main
conda 310.8 kB | osx-64/r-paralleldist-0.2.6-r42hac7d2d5_2.conda  1 year and 7 months ago 169 main
conda 324.2 kB | linux-64/r-paralleldist-0.2.6-r43ha503ecb_2.conda  1 year and 7 months ago 1942 main
conda 323.8 kB | linux-64/r-paralleldist-0.2.6-r42ha503ecb_2.conda  1 year and 7 months ago 1598 main
conda 352.4 kB | win-64/r-paralleldist-0.2.6-r41ha856d6a_1.tar.bz2  2 years and 3 months ago 545 main
conda 353.9 kB | osx-64/r-paralleldist-0.2.6-r41h49197e3_1.tar.bz2  2 years and 3 months ago 74 main
conda 353.8 kB | osx-64/r-paralleldist-0.2.6-r42h49197e3_1.tar.bz2  2 years and 3 months ago 88 main
conda 363.0 kB | linux-64/r-paralleldist-0.2.6-r41h7525677_1.tar.bz2  2 years and 3 months ago 1725 main
conda 362.9 kB | linux-64/r-paralleldist-0.2.6-r42h7525677_1.tar.bz2  2 years and 3 months ago 2023 main
conda 359.7 kB | win-64/r-paralleldist-0.2.6-r40ha856d6a_0.tar.bz2  2 years and 11 months ago 714 main
conda 355.3 kB | win-64/r-paralleldist-0.2.6-r41ha856d6a_0.tar.bz2  2 years and 11 months ago 712 main
conda 344.2 kB | osx-64/r-paralleldist-0.2.6-r41h9951f98_0.tar.bz2  2 years and 11 months ago 90 main
conda 344.1 kB | osx-64/r-paralleldist-0.2.6-r40h9951f98_0.tar.bz2  2 years and 11 months ago 81 main
conda 376.5 kB | linux-64/r-paralleldist-0.2.6-r40h03ef668_0.tar.bz2  2 years and 11 months ago 2034 main
conda 376.6 kB | linux-64/r-paralleldist-0.2.6-r41h03ef668_0.tar.bz2  2 years and 11 months ago 2169 main

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