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Contains tools for rapidly computing distance matrices and clustering large sequence datasets using fast alignment-free k-mer counting and recursive k-means partitioning. See Vinga and Almeida (2003) <doi:10.1093/bioinformatics/btg005> for a review of k-mer counting methods and applications for biological sequence analysis.

copied from cf-post-staging / r-kmer
Type Size Name Uploaded Downloads Labels
conda 423.7 kB | osx-arm64/r-kmer-1.1.3-r44h1380947_0.conda  4 months and 18 days ago 45 main
conda 424.5 kB | osx-arm64/r-kmer-1.1.3-r45h1380947_0.conda  4 months and 18 days ago 34 main
conda 425.1 kB | osx-64/r-kmer-1.1.3-r45hed9a748_0.conda  4 months and 18 days ago 39 main
conda 424.5 kB | win-64/r-kmer-1.1.3-r45hd8a2815_0.conda  4 months and 18 days ago 47 main
conda 424.6 kB | osx-64/r-kmer-1.1.3-r44hed9a748_0.conda  4 months and 18 days ago 39 main
conda 425.2 kB | win-64/r-kmer-1.1.3-r44hd8a2815_0.conda  4 months and 18 days ago 54 main
conda 430.0 kB | linux-64/r-kmer-1.1.3-r44h3697838_0.conda  4 months and 18 days ago 361 main
conda 430.4 kB | linux-64/r-kmer-1.1.3-r45h3697838_0.conda  4 months and 18 days ago 339 main

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