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conda-forge / packages / r-immunarch

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A comprehensive framework for bioinformatics exploratory analysis of bulk and single-cell T-cell receptor and antibody repertoires. It provides seamless data loading, analysis and visualisation for AIRR (Adaptive Immune Receptor Repertoire) data, both bulk immunosequencing (RepSeq) and single-cell sequencing (scRNAseq). It implements most of the widely used AIRR analysis methods, such as: clonality analysis, estimation of repertoire similarities in distribution of clonotypes and gene segments, repertoire diversity analysis, annotation of clonotypes using external immune receptor databases and clonotype tracking in vaccination and cancer studies. A successor to our previously published 'tcR' immunoinformatics package (Nazarov 2015) <doi:10.1186/s12859-015-0613-1>.

copied from cf-staging / r-immunarch

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Type	Size	Name	Uploaded	Downloads	Labels
conda	5.0 MB	\| win-64/r-immunarch-0.9.1-r44h8ae3a7c_1.conda	1 month and 4 days ago	21	main
conda	5.0 MB	\| win-64/r-immunarch-0.9.1-r43h8ae3a7c_1.conda	1 month and 4 days ago	20	main
conda	5.0 MB	\| osx-64/r-immunarch-0.9.1-r43hb79fae8_1.conda	1 month and 4 days ago	18	main
conda	5.0 MB	\| osx-64/r-immunarch-0.9.1-r44hb79fae8_1.conda	1 month and 4 days ago	17	main
conda	5.0 MB	\| linux-64/r-immunarch-0.9.1-r43h93ab643_1.conda	1 month and 4 days ago	147	main
conda	5.0 MB	\| linux-64/r-immunarch-0.9.1-r44h93ab643_1.conda	1 month and 4 days ago	153	main
conda	5.0 MB	\| win-64/r-immunarch-0.9.1-r41ha856d6a_0.conda	8 months and 15 days ago	211	main
conda	5.0 MB	\| osx-64/r-immunarch-0.9.1-r43h29979af_0.conda	8 months and 15 days ago	179	main
conda	5.0 MB	\| osx-64/r-immunarch-0.9.1-r42h29979af_0.conda	8 months and 15 days ago	177	main
conda	5.0 MB	\| linux-64/r-immunarch-0.9.1-r43ha503ecb_0.conda	8 months and 15 days ago	1048	main
conda	5.0 MB	\| linux-64/r-immunarch-0.9.1-r42ha503ecb_0.conda	8 months and 15 days ago	1075	main
conda	5.0 MB	\| win-64/r-immunarch-0.9.0-r41ha856d6a_1.conda	1 year and 4 months ago	412	main
conda	5.0 MB	\| osx-64/r-immunarch-0.9.0-r43hac7d2d5_1.conda	1 year and 4 months ago	194	main
conda	5.0 MB	\| osx-64/r-immunarch-0.9.0-r42hac7d2d5_1.conda	1 year and 4 months ago	217	main
conda	5.0 MB	\| linux-64/r-immunarch-0.9.0-r42ha503ecb_1.conda	1 year and 4 months ago	1511	main
conda	5.0 MB	\| linux-64/r-immunarch-0.9.0-r43ha503ecb_1.conda	1 year and 4 months ago	1177	main
conda	5.0 MB	\| win-64/r-immunarch-0.9.0-r41ha856d6a_0.conda	1 year and 11 months ago	612	main
conda	5.0 MB	\| osx-64/r-immunarch-0.9.0-r42h49197e3_0.conda	1 year and 11 months ago	233	main
conda	5.0 MB	\| osx-64/r-immunarch-0.9.0-r41h49197e3_0.conda	1 year and 11 months ago	235	main
conda	5.0 MB	\| linux-64/r-immunarch-0.9.0-r41h38f115c_0.conda	1 year and 11 months ago	1911	main
conda	5.0 MB	\| linux-64/r-immunarch-0.9.0-r42h38f115c_0.conda	1 year and 11 months ago	1605	main
conda	5.4 MB	\| win-64/r-immunarch-0.8.0-r41ha856d6a_1.tar.bz2	2 years and 1 month ago	530	main
conda	5.4 MB	\| osx-64/r-immunarch-0.8.0-r41h49197e3_1.tar.bz2	2 years and 1 month ago	70	main
conda	5.4 MB	\| osx-64/r-immunarch-0.8.0-r42h49197e3_1.tar.bz2	2 years and 1 month ago	68	main
conda	5.4 MB	\| linux-64/r-immunarch-0.8.0-r41h7525677_1.tar.bz2	2 years and 1 month ago	1545	main
conda	5.4 MB	\| linux-64/r-immunarch-0.8.0-r42h7525677_1.tar.bz2	2 years and 1 month ago	1575	main
conda	5.4 MB	\| win-64/r-immunarch-0.8.0-r41ha856d6a_0.tar.bz2	2 years and 1 month ago	521	main
conda	5.4 MB	\| osx-64/r-immunarch-0.8.0-r41h49197e3_0.tar.bz2	2 years and 1 month ago	69	main
conda	5.4 MB	\| linux-64/r-immunarch-0.8.0-r41h7525677_0.tar.bz2	2 years and 1 month ago	1499	main
conda	5.5 MB	\| win-64/r-immunarch-0.7.0-r40ha856d6a_0.tar.bz2	2 years and 3 months ago	605	main
conda	5.4 MB	\| osx-64/r-immunarch-0.7.0-r40h64890a7_0.tar.bz2	2 years and 3 months ago	76	main
conda	5.4 MB	\| osx-64/r-immunarch-0.7.0-r41h64890a7_0.tar.bz2	2 years and 3 months ago	75	main
conda	5.4 MB	\| linux-64/r-immunarch-0.7.0-r41h7525677_0.tar.bz2	2 years and 3 months ago	1724	main
conda	5.4 MB	\| linux-64/r-immunarch-0.7.0-r40h7525677_0.tar.bz2	2 years and 3 months ago	1672	main
conda	6.3 MB	\| win-64/r-immunarch-0.6.7-r41ha856d6a_0.tar.bz2	3 years and 1 month ago	712	main
conda	6.4 MB	\| win-64/r-immunarch-0.6.7-r40ha856d6a_0.tar.bz2	3 years and 1 month ago	723	main
conda	6.3 MB	\| osx-64/r-immunarch-0.6.7-r40h9951f98_0.tar.bz2	3 years and 1 month ago	85	main
conda	6.3 MB	\| osx-64/r-immunarch-0.6.7-r41h9951f98_0.tar.bz2	3 years and 1 month ago	94	main
conda	6.3 MB	\| linux-64/r-immunarch-0.6.7-r40h03ef668_0.tar.bz2	3 years and 1 month ago	1953	main
conda	6.3 MB	\| linux-64/r-immunarch-0.6.7-r41h03ef668_0.tar.bz2	3 years and 1 month ago	2101	main
conda	6.3 MB	\| win-64/r-immunarch-0.6.6-r41ha856d6a_0.tar.bz2	3 years and 4 months ago	744	main
conda	6.3 MB	\| osx-64/r-immunarch-0.6.6-r40h9951f98_0.tar.bz2	3 years and 4 months ago	107	main
conda	6.3 MB	\| osx-64/r-immunarch-0.6.6-r41h9951f98_0.tar.bz2	3 years and 4 months ago	103	main
conda	6.3 MB	\| linux-64/r-immunarch-0.6.6-r40h03ef668_0.tar.bz2	3 years and 4 months ago	2095	main
conda	6.3 MB	\| linux-64/r-immunarch-0.6.6-r41h03ef668_0.tar.bz2	3 years and 4 months ago	2089	main
conda	6.3 MB	\| win-64/r-immunarch-0.6.5-r41ha856d6a_0.tar.bz2	3 years and 6 months ago	796	main
conda	6.3 MB	\| win-64/r-immunarch-0.6.5-r40ha856d6a_0.tar.bz2	3 years and 6 months ago	765	main
conda	6.3 MB	\| osx-64/r-immunarch-0.6.5-r40h9951f98_0.tar.bz2	3 years and 6 months ago	133	main
conda	6.3 MB	\| osx-64/r-immunarch-0.6.5-r41h9951f98_0.tar.bz2	3 years and 6 months ago	139	main
conda	6.3 MB	\| linux-64/r-immunarch-0.6.5-r41h03ef668_0.tar.bz2	3 years and 6 months ago	2150	main

conda-forge / packages / r-immunarch 0

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conda-forge / packages / r-immunarch

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