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conda-forge / packages / r-ic10trainingdata

Training datasets for iC10; which implements the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group. Genomic annotation for the training dataset has been obtained from Mark Dunning's lluminaHumanv3.db package.

copied from cf-staging / r-ic10trainingdata

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Type Size Name Uploaded Downloads Labels
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r44hc72bb7e_1005.conda  8 months and 22 days ago 631 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r43hc72bb7e_1005.conda  8 months and 22 days ago 629 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r42hc72bb7e_1004.conda  1 year and 9 months ago 1074 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r43hc72bb7e_1004.conda  1 year and 9 months ago 1127 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r42hc72bb7e_1003.tar.bz2  2 years and 5 months ago 1469 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r41hc72bb7e_1003.tar.bz2  2 years and 5 months ago 1623 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r40hc72bb7e_1002.tar.bz2  3 years and 10 months ago 2126 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r41hc72bb7e_1002.tar.bz2  3 years and 10 months ago 2323 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r36h6115d3f_1002.tar.bz2  4 years and 10 months ago 3026 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r40h6115d3f_1002.tar.bz2  4 years and 10 months ago 3078 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r35h6115d3f_1001.tar.bz2  5 years and 8 months ago 3933 main cf202003
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r36h6115d3f_1001.tar.bz2  5 years and 8 months ago 3957 main cf202003
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r351h6115d3f_1000.tar.bz2  6 years and 4 months ago 4860 main cf202003 gcc7 cf201901
conda 6.1 MB | linux-64/r-ic10trainingdata-1.3.1-r351h6115d3f_0.tar.bz2  6 years and 5 months ago 4803 main cf202003 cf201901
conda 6.1 MB | win-64/r-ic10trainingdata-1.3.1-r351h6115d3f_0.tar.bz2  6 years and 6 months ago 1722 main cf202003 cf201901
conda 6.1 MB | win-64/r-ic10trainingdata-1.3.1-r341h6115d3f_0.tar.bz2  6 years and 6 months ago 1722 main cf202003 cf201901
conda 6.1 MB | osx-64/r-ic10trainingdata-1.3.1-r351h6115d3f_0.tar.bz2  6 years and 6 months ago 362 main cf202003 cf201901
conda 6.1 MB | osx-64/r-ic10trainingdata-1.3.1-r341h6115d3f_0.tar.bz2  6 years and 6 months ago 360 main cf202003 cf201901
conda 6.1 MB | linux-64/r-ic10trainingdata-1.3.1-r341h6115d3f_0.tar.bz2  6 years and 6 months ago 4873 main cf202003 cf201901
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