Training datasets for iC10; which implements the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group. Genomic annotation for the training dataset has been obtained from Mark Dunning's lluminaHumanv3.db package.
copied from cf-staging / r-ic10trainingdata
conda install conda-forge::r-ic10trainingdataconda install conda-forge/label/cf201901::r-ic10trainingdataconda install conda-forge/label/cf202003::r-ic10trainingdataconda install conda-forge/label/gcc7::r-ic10trainingdata