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conda-forge / packages / r-ic10trainingdata

Training datasets for iC10; which implements the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group. Genomic annotation for the training dataset has been obtained from Mark Dunning's lluminaHumanv3.db package.

copied from cf-staging / r-ic10trainingdata
Type Size Name Uploaded Downloads Labels
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r44hc72bb7e_1005.conda  8 months and 29 days ago 645 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r43hc72bb7e_1005.conda  8 months and 29 days ago 641 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r42hc72bb7e_1004.conda  1 year and 9 months ago 1090 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r43hc72bb7e_1004.conda  1 year and 9 months ago 1143 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r42hc72bb7e_1003.tar.bz2  2 years and 5 months ago 1486 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r41hc72bb7e_1003.tar.bz2  2 years and 5 months ago 1636 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r40hc72bb7e_1002.tar.bz2  3 years and 10 months ago 2144 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r41hc72bb7e_1002.tar.bz2  3 years and 10 months ago 2335 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r36h6115d3f_1002.tar.bz2  4 years and 11 months ago 3038 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r40h6115d3f_1002.tar.bz2  4 years and 11 months ago 3097 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r35h6115d3f_1001.tar.bz2  5 years and 8 months ago 3949 main cf202003
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r36h6115d3f_1001.tar.bz2  5 years and 8 months ago 3973 main cf202003
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r351h6115d3f_1000.tar.bz2  6 years and 4 months ago 4878 main cf202003 gcc7 cf201901
conda 6.1 MB | linux-64/r-ic10trainingdata-1.3.1-r351h6115d3f_0.tar.bz2  6 years and 5 months ago 4820 main cf202003 cf201901
conda 6.1 MB | win-64/r-ic10trainingdata-1.3.1-r351h6115d3f_0.tar.bz2  6 years and 6 months ago 1722 main cf202003 cf201901
conda 6.1 MB | win-64/r-ic10trainingdata-1.3.1-r341h6115d3f_0.tar.bz2  6 years and 6 months ago 1722 main cf202003 cf201901
conda 6.1 MB | osx-64/r-ic10trainingdata-1.3.1-r351h6115d3f_0.tar.bz2  6 years and 6 months ago 362 main cf202003 cf201901
conda 6.1 MB | osx-64/r-ic10trainingdata-1.3.1-r341h6115d3f_0.tar.bz2  6 years and 6 months ago 360 main cf202003 cf201901
conda 6.1 MB | linux-64/r-ic10trainingdata-1.3.1-r341h6115d3f_0.tar.bz2  6 years and 6 months ago 4891 main cf202003 cf201901

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