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conda-forge / packages / r-ic10trainingdata

Training datasets for iC10; which implements the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group. Genomic annotation for the training dataset has been obtained from Mark Dunning's lluminaHumanv3.db package.

copied from cf-staging / r-ic10trainingdata

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Type Size Name Uploaded Downloads Labels
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r44hc72bb7e_1005.conda  8 months and 27 days ago 642 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r43hc72bb7e_1005.conda  8 months and 27 days ago 639 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r42hc72bb7e_1004.conda  1 year and 9 months ago 1087 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r43hc72bb7e_1004.conda  1 year and 9 months ago 1140 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r42hc72bb7e_1003.tar.bz2  2 years and 5 months ago 1481 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r41hc72bb7e_1003.tar.bz2  2 years and 5 months ago 1632 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r40hc72bb7e_1002.tar.bz2  3 years and 10 months ago 2140 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r41hc72bb7e_1002.tar.bz2  3 years and 10 months ago 2331 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r36h6115d3f_1002.tar.bz2  4 years and 11 months ago 3036 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r40h6115d3f_1002.tar.bz2  4 years and 11 months ago 3092 main
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r35h6115d3f_1001.tar.bz2  5 years and 8 months ago 3946 main cf202003
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r36h6115d3f_1001.tar.bz2  5 years and 8 months ago 3969 main cf202003
conda 6.1 MB | noarch/r-ic10trainingdata-1.3.1-r351h6115d3f_1000.tar.bz2  6 years and 4 months ago 4874 main cf202003 gcc7 cf201901
conda 6.1 MB | linux-64/r-ic10trainingdata-1.3.1-r351h6115d3f_0.tar.bz2  6 years and 5 months ago 4814 main cf202003 cf201901
conda 6.1 MB | win-64/r-ic10trainingdata-1.3.1-r351h6115d3f_0.tar.bz2  6 years and 6 months ago 1722 main cf202003 cf201901
conda 6.1 MB | win-64/r-ic10trainingdata-1.3.1-r341h6115d3f_0.tar.bz2  6 years and 6 months ago 1722 main cf202003 cf201901
conda 6.1 MB | osx-64/r-ic10trainingdata-1.3.1-r351h6115d3f_0.tar.bz2  6 years and 6 months ago 362 main cf202003 cf201901
conda 6.1 MB | osx-64/r-ic10trainingdata-1.3.1-r341h6115d3f_0.tar.bz2  6 years and 6 months ago 360 main cf202003 cf201901
conda 6.1 MB | linux-64/r-ic10trainingdata-1.3.1-r341h6115d3f_0.tar.bz2  6 years and 6 months ago 4885 main cf202003 cf201901
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