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Offers the Generalized Berk-Jones (GBJ) test for set-based inference in genetic association studies. The GBJ is designed as an alternative to tests such as Berk-Jones (BJ), Higher Criticism (HC), Generalized Higher Criticism (GHC), Minimum p-value (minP), and Sequence Kernel Association Test (SKAT). All of these other methods (except for SKAT) are also implemented in this package, and we additionally provide an omnibus test (OMNI) which integrates information from each of the tests. The GBJ has been shown to outperform other tests in genetic association studies when signals are correlated and moderately sparse. Please see the vignette for a quickstart guide or the paper at <doi:10.1080/01621459.2019.1660170> for full details.

copied from cf-staging / r-gbj
Type Size Name Uploaded Downloads Labels
conda 156.1 kB | win-64/r-gbj-0.5.3-r44h8ae3a7c_3.conda  4 months and 9 days ago 122 main
conda 154.9 kB | win-64/r-gbj-0.5.3-r43h8ae3a7c_3.conda  4 months and 9 days ago 118 main
conda 157.1 kB | osx-64/r-gbj-0.5.3-r43h25d921d_3.conda  4 months and 9 days ago 270 main
conda 158.6 kB | osx-64/r-gbj-0.5.3-r44h25d921d_3.conda  4 months and 9 days ago 100 main
conda 158.8 kB | linux-64/r-gbj-0.5.3-r44h0d4f4ea_3.conda  4 months and 9 days ago 547 main
conda 157.5 kB | linux-64/r-gbj-0.5.3-r43h0d4f4ea_3.conda  4 months and 9 days ago 921 main
conda 158.8 kB | win-64/r-gbj-0.5.3-r41ha856d6a_2.conda  1 year and 5 months ago 354 main
conda 155.4 kB | osx-64/r-gbj-0.5.3-r43hac7d2d5_2.conda  1 year and 5 months ago 307 main
conda 156.5 kB | osx-64/r-gbj-0.5.3-r42hac7d2d5_2.conda  1 year and 5 months ago 158 main
conda 156.5 kB | linux-64/r-gbj-0.5.3-r43ha503ecb_2.conda  1 year and 5 months ago 1695 main
conda 156.7 kB | linux-64/r-gbj-0.5.3-r42ha503ecb_2.conda  1 year and 5 months ago 1338 main
conda 171.7 kB | win-64/r-gbj-0.5.3-r41ha856d6a_1.tar.bz2  2 years and 1 month ago 519 main
conda 166.7 kB | osx-64/r-gbj-0.5.3-r41h49197e3_1.tar.bz2  2 years and 1 month ago 69 main
conda 166.8 kB | osx-64/r-gbj-0.5.3-r42h49197e3_1.tar.bz2  2 years and 1 month ago 70 main
conda 167.9 kB | linux-64/r-gbj-0.5.3-r42h7525677_1.tar.bz2  2 years and 1 month ago 1514 main
conda 167.6 kB | linux-64/r-gbj-0.5.3-r41h7525677_1.tar.bz2  2 years and 1 month ago 1522 main
conda 171.1 kB | win-64/r-gbj-0.5.3-r41ha856d6a_0.tar.bz2  2 years and 6 months ago 697 main
conda 177.7 kB | win-64/r-gbj-0.5.3-r40ha856d6a_0.tar.bz2  2 years and 6 months ago 700 main
conda 166.9 kB | osx-64/r-gbj-0.5.3-r40h8619c4b_0.tar.bz2  2 years and 6 months ago 83 main
conda 166.7 kB | osx-64/r-gbj-0.5.3-r41h8619c4b_0.tar.bz2  2 years and 6 months ago 83 main
conda 167.1 kB | linux-64/r-gbj-0.5.3-r41h7525677_0.tar.bz2  2 years and 6 months ago 1845 main
conda 167.4 kB | linux-64/r-gbj-0.5.3-r40h7525677_0.tar.bz2  2 years and 6 months ago 1839 main

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