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Integrates pathway information into the differential network analysis of two gene expression datasets as described in Grimes, Potter, and Datta (2019) <doi:10.1038/s41598-019-41918-3>. Provides summary functions to break down the results at the pathway, gene, or individual connection level. The differential networks for each pathway of interest can be plotted, and the visualization will highlight any differentially expressed genes and all of the gene-gene associations that are significantly differentially connected.

copied from cf-post-staging / r-dnapath
Type Size Name Uploaded Downloads Labels
conda 749.4 kB | win-64/r-dnapath-0.7.6-r45hd8a2815_1.conda  6 months and 14 days ago 76 main
conda 751.8 kB | osx-64/r-dnapath-0.7.6-r44ha730edb_1.conda  6 months and 14 days ago 66 main
conda 753.7 kB | osx-64/r-dnapath-0.7.6-r45ha730edb_1.conda  6 months and 14 days ago 73 main
conda 750.5 kB | win-64/r-dnapath-0.7.6-r44hd8a2815_1.conda  6 months and 14 days ago 72 main
conda 753.7 kB | linux-64/r-dnapath-0.7.6-r45h3697838_1.conda  6 months and 14 days ago 454 main
conda 753.6 kB | linux-64/r-dnapath-0.7.6-r44h3697838_1.conda  6 months and 14 days ago 442 main
conda 774.3 kB | win-64/r-dnapath-0.7.6-r43h8ae3a7c_0.conda  1 year and 1 month ago 88 main
conda 751.2 kB | win-64/r-dnapath-0.7.6-r44h8ae3a7c_0.conda  1 year and 1 month ago 88 main
conda 774.9 kB | osx-64/r-dnapath-0.7.6-r43h2711daa_0.conda  1 year and 1 month ago 66 main
conda 755.1 kB | osx-64/r-dnapath-0.7.6-r44h2711daa_0.conda  1 year and 1 month ago 70 main
conda 776.3 kB | linux-64/r-dnapath-0.7.6-r43h93ab643_0.conda  1 year and 1 month ago 919 main
conda 753.4 kB | linux-64/r-dnapath-0.7.6-r44h93ab643_0.conda  1 year and 1 month ago 902 main

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