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Integrates pathway information into the differential network analysis of two gene expression datasets as described in Grimes, Potter, and Datta (2019) <doi:10.1038/s41598-019-41918-3>. Provides summary functions to break down the results at the pathway, gene, or individual connection level. The differential networks for each pathway of interest can be plotted, and the visualization will highlight any differentially expressed genes and all of the gene-gene associations that are significantly differentially connected.

copied from cf-post-staging / r-dnapath
Type Size Name Uploaded Downloads Labels
conda 854.0 kB | osx-64/r-dnapath-0.7.4-r42h49197e3_1.tar.bz2  3 years and 5 months ago 89 main
conda 843.5 kB | linux-64/r-dnapath-0.7.4-r41h7525677_1.tar.bz2  3 years and 5 months ago 2577 main
conda 853.4 kB | linux-64/r-dnapath-0.7.4-r42h7525677_1.tar.bz2  3 years and 5 months ago 2603 main
conda 859.8 kB | win-64/r-dnapath-0.7.4-r40ha856d6a_0.tar.bz2  3 years and 9 months ago 714 main
conda 848.8 kB | win-64/r-dnapath-0.7.4-r41ha856d6a_0.tar.bz2  3 years and 9 months ago 719 main
conda 853.0 kB | osx-64/r-dnapath-0.7.4-r40h8619c4b_0.tar.bz2  3 years and 9 months ago 97 main
conda 853.0 kB | osx-64/r-dnapath-0.7.4-r41h8619c4b_0.tar.bz2  3 years and 9 months ago 96 main
conda 852.9 kB | linux-64/r-dnapath-0.7.4-r40h7525677_0.tar.bz2  3 years and 9 months ago 2958 main
conda 841.7 kB | linux-64/r-dnapath-0.7.4-r41h7525677_0.tar.bz2  3 years and 9 months ago 2926 main

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