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Integrates pathway information into the differential network analysis of two gene expression datasets as described in Grimes, Potter, and Datta (2019) <doi:10.1038/s41598-019-41918-3>. Provides summary functions to break down the results at the pathway, gene, or individual connection level. The differential networks for each pathway of interest can be plotted, and the visualization will highlight any differentially expressed genes and all of the gene-gene associations that are significantly differentially connected.

copied from cf-post-staging / r-dnapath
Type Size Name Uploaded Downloads Labels
conda 749.4 kB | win-64/r-dnapath-0.7.6-r45hd8a2815_1.conda  3 months and 13 days ago 62 main
conda 751.8 kB | osx-64/r-dnapath-0.7.6-r44ha730edb_1.conda  3 months and 13 days ago 55 main
conda 753.7 kB | osx-64/r-dnapath-0.7.6-r45ha730edb_1.conda  3 months and 13 days ago 62 main
conda 750.5 kB | win-64/r-dnapath-0.7.6-r44hd8a2815_1.conda  3 months and 13 days ago 58 main
conda 753.7 kB | linux-64/r-dnapath-0.7.6-r45h3697838_1.conda  3 months and 13 days ago 275 main
conda 753.6 kB | linux-64/r-dnapath-0.7.6-r44h3697838_1.conda  3 months and 13 days ago 275 main
conda 774.3 kB | win-64/r-dnapath-0.7.6-r43h8ae3a7c_0.conda  10 months and 16 days ago 75 main
conda 751.2 kB | win-64/r-dnapath-0.7.6-r44h8ae3a7c_0.conda  10 months and 16 days ago 75 main
conda 774.9 kB | osx-64/r-dnapath-0.7.6-r43h2711daa_0.conda  10 months and 16 days ago 54 main
conda 755.1 kB | osx-64/r-dnapath-0.7.6-r44h2711daa_0.conda  10 months and 16 days ago 58 main
conda 776.3 kB | linux-64/r-dnapath-0.7.6-r43h93ab643_0.conda  10 months and 16 days ago 753 main
conda 753.4 kB | linux-64/r-dnapath-0.7.6-r44h93ab643_0.conda  10 months and 16 days ago 739 main

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