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Provides R users with direct access to genomic and clinical data from the 'cBioPortal' web resource via user-friendly functions that wrap 'cBioPortal's' existing API endpoints <https://www.cbioportal.org/api/swagger-ui/index.html>. Users can browse and query genomic data on mutations, copy number alterations and fusions, as well as data on tumor mutational burden ('TMB'), microsatellite instability status ('MSI'), 'FACETS' and select clinical data points (depending on the study). See <https://www.cbioportal.org/> and Gao et al., (2013) <doi:10.1126/scisignal.2004088> for more information on the cBioPortal web resource.

copied from cf-post-staging / r-cbioportalr
Type Size Name Uploaded Downloads Labels
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r42hc72bb7e_2.conda  2 years and 3 months ago 1405 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r43hc72bb7e_2.conda  2 years and 3 months ago 1448 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r42hc72bb7e_1.tar.bz2  2 years and 11 months ago 1774 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r41hc72bb7e_1.tar.bz2  2 years and 11 months ago 1744 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r41hc72bb7e_0.tar.bz2  3 years and 30 days ago 1963 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r40hc72bb7e_0.tar.bz2  3 years and 30 days ago 1966 main

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