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Provides methods for high-throughput adaptive immune receptor repertoire sequencing (AIRR-Seq; Rep-Seq) analysis. In particular, immunoglobulin (Ig) sequence lineage reconstruction, lineage topology analysis, diversity profiling, amino acid property analysis and gene usage. Citations: Gupta and Vander Heiden, et al (2017) <doi:10.1093/bioinformatics/btv359>, Stern, Yaari and Vander Heiden, et al (2014) <doi:10.1126/scitranslmed.3008879>.

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Type Size Name Uploaded Downloads Labels
conda 2.0 MB | win-64/r-alakazam-1.0.0-r36h796a38f_0.tar.bz2  4 years and 7 months ago 1016 main
conda 2.0 MB | win-64/r-alakazam-1.0.0-r40h796a38f_0.tar.bz2  4 years and 7 months ago 1013 main
conda 1.9 MB | osx-64/r-alakazam-1.0.0-r40hc5da6b9_0.tar.bz2  4 years and 7 months ago 333 main
conda 1.9 MB | osx-64/r-alakazam-1.0.0-r36hc5da6b9_0.tar.bz2  4 years and 7 months ago 317 main
conda 1.9 MB | linux-64/r-alakazam-1.0.0-r40h0357c0b_0.tar.bz2  4 years and 7 months ago 2933 main
conda 2.0 MB | linux-64/r-alakazam-1.0.0-r36h0357c0b_0.tar.bz2  4 years and 7 months ago 2922 main

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