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Toolset for the exploration of genetic and genomic data. Adegenet provides formal (S4) classes for storing and handling various genetic data, including genetic markers with varying ploidy and hierarchical population structure ('genind' class), alleles counts by populations ('genpop'), and genome-wide SNP data ('genlight'). It also implements original multivariate methods (DAPC, sPCA), graphics, statistical tests, simulation tools, distance and similarity measures, and several spatial methods. A range of both empirical and simulated datasets is also provided to illustrate various methods.

copied from cf-staging / r-adegenet
Type Size Name Uploaded Downloads Labels
conda 2.8 MB | win-64/r-adegenet-2.1.3-r41h6d2157b_1.tar.bz2  3 years and 9 months ago 805 main
conda 2.9 MB | win-64/r-adegenet-2.1.3-r40h6d2157b_1.tar.bz2  3 years and 9 months ago 796 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r40h28b5c78_1.tar.bz2  3 years and 9 months ago 161 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r41h28b5c78_1.tar.bz2  3 years and 9 months ago 145 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r40hcfec24a_1.tar.bz2  3 years and 9 months ago 2417 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r41hcfec24a_1.tar.bz2  3 years and 9 months ago 2443 main
conda 2.9 MB | win-64/r-adegenet-2.1.3-r40hda5aaf8_1.tar.bz2  4 years and 8 months ago 1059 main
conda 3.0 MB | win-64/r-adegenet-2.1.3-r36hda5aaf8_1.tar.bz2  4 years and 8 months ago 1042 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r36h17f1fa6_1.tar.bz2  4 years and 8 months ago 381 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r40h17f1fa6_1.tar.bz2  4 years and 8 months ago 375 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r36hcdcec82_1.tar.bz2  4 years and 8 months ago 3281 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r40hcdcec82_1.tar.bz2  4 years and 8 months ago 3257 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r36h17f1fa6_0.tar.bz2  4 years and 9 months ago 328 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r40h17f1fa6_0.tar.bz2  4 years and 9 months ago 332 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r36hcdcec82_0.tar.bz2  4 years and 9 months ago 3135 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r40hcdcec82_0.tar.bz2  4 years and 9 months ago 3112 main

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