The Trans-Proteomic Pipeline (TPP) is a collection of integrated tools for MS/MS proteomics developed at the Seattle Proteome Center. The Bioconda package includes the command-line versions of the TPP toolset. These programs include tools for validation (PeptideProphet, iProphet, ProteinProphet, Mayu) and quantification (XPRESS, ASAPRatio, Libra) as well as a number of parsers and converters (Out2XML, Mascot2XML, Tandem2XML, etc).


Info: This package contains files in non-standard labels.

conda install

  • linux-64  v5.0.0
To install this package with conda run one of the following:
conda install -c bioconda tpp
conda install -c bioconda/label/cf201901 tpp


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