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Detects splice junctions from RNA-seq data. This method does not depend on any existing annotation of gene structures and is capable of finding novel splice junctions with high sensitivity and specificity. It can handle long reads (50–100 nt) and can exploit paired-read information to improve mapping accuracy.

Type Size Name Uploaded Downloads Labels
conda 309.4 kB | osx-64/splicemap-3.3.5.2-h5fa12a8_7.conda  1 month and 1 day ago 46 main
conda 300.3 kB | osx-arm64/splicemap-3.3.5.2-h4675bf2_7.conda  1 month and 1 day ago 21 main
conda 274.7 kB | linux-aarch64/splicemap-3.3.5.2-h163da20_7.conda  1 month and 1 day ago 48 main
conda 310.5 kB | linux-64/splicemap-3.3.5.2-h9948957_7.conda  1 month and 1 day ago 59 main
conda 463.4 kB | osx-64/splicemap-3.3.5.2-h5fa12a8_6.tar.bz2  9 months and 26 days ago 52 main
conda 444.6 kB | linux-64/splicemap-3.3.5.2-h9948957_6.tar.bz2  9 months and 26 days ago 131 main
conda 458.1 kB | osx-64/splicemap-3.3.5.2-h85dcccf_5.tar.bz2  2 years and 4 months ago 62 main
conda 440.1 kB | linux-64/splicemap-3.3.5.2-h4ac6f70_5.tar.bz2  2 years and 4 months ago 158 main
conda 408.7 kB | linux-64/splicemap-3.3.5.2-h9f5acd7_4.tar.bz2  3 years and 7 months ago 200 main
conda 406.8 kB | osx-64/splicemap-3.3.5.2-hcd10b59_4.tar.bz2  3 years and 7 months ago 2168 main
conda 397.0 kB | linux-64/splicemap-3.3.5.2-h7d875b9_3.tar.bz2  4 years and 6 months ago 224 main
conda 404.2 kB | osx-64/splicemap-3.3.5.2-hb280591_3.tar.bz2  4 years and 6 months ago 696 main
conda 415.0 kB | osx-64/splicemap-3.3.5.2-ha1b3eb9_2.tar.bz2  5 years and 2 months ago 546 main
conda 416.9 kB | linux-64/splicemap-3.3.5.2-hc9558a2_2.tar.bz2  5 years and 2 months ago 230 main
conda 424.2 kB | linux-64/splicemap-3.3.5.2-1.tar.bz2  7 years and 3 months ago 431 main cf201901
conda 419.4 kB | osx-64/splicemap-3.3.5.2-1.tar.bz2  7 years and 3 months ago 963 main cf201901
conda 419.1 kB | osx-64/splicemap-3.3.5.2-0.tar.bz2  7 years and 4 months ago 310 main cf201901
conda 428.9 kB | linux-64/splicemap-3.3.5.2-0.tar.bz2  7 years and 4 months ago 410 main cf201901

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