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bioconda / packages / splicemap

Detects splice junctions from RNA-seq data. This method does not depend on any existing annotation of gene structures and is capable of finding novel splice junctions with high sensitivity and specificity. It can handle long reads (50–100 nt) and can exploit paired-read information to improve mapping accuracy.

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Type Size Name Uploaded Downloads Labels
conda 463.4 kB | osx-64/splicemap-3.3.5.2-h5fa12a8_6.tar.bz2  4 months and 11 days ago 27 main
conda 444.6 kB | linux-64/splicemap-3.3.5.2-h9948957_6.tar.bz2  4 months and 11 days ago 60 main
conda 458.1 kB | osx-64/splicemap-3.3.5.2-h85dcccf_5.tar.bz2  1 year and 11 months ago 48 main
conda 440.1 kB | linux-64/splicemap-3.3.5.2-h4ac6f70_5.tar.bz2  1 year and 11 months ago 118 main
conda 408.7 kB | linux-64/splicemap-3.3.5.2-h9f5acd7_4.tar.bz2  3 years and 2 months ago 162 main
conda 406.8 kB | osx-64/splicemap-3.3.5.2-hcd10b59_4.tar.bz2  3 years and 2 months ago 2112 main
conda 397.0 kB | linux-64/splicemap-3.3.5.2-h7d875b9_3.tar.bz2  4 years and 29 days ago 184 main
conda 404.2 kB | osx-64/splicemap-3.3.5.2-hb280591_3.tar.bz2  4 years and 1 month ago 684 main
conda 415.0 kB | osx-64/splicemap-3.3.5.2-ha1b3eb9_2.tar.bz2  4 years and 9 months ago 533 main
conda 416.9 kB | linux-64/splicemap-3.3.5.2-hc9558a2_2.tar.bz2  4 years and 9 months ago 190 main
conda 424.2 kB | linux-64/splicemap-3.3.5.2-1.tar.bz2  6 years and 10 months ago 385 main cf201901
conda 419.4 kB | osx-64/splicemap-3.3.5.2-1.tar.bz2  6 years and 10 months ago 948 main cf201901
conda 419.1 kB | osx-64/splicemap-3.3.5.2-0.tar.bz2  6 years and 10 months ago 296 main cf201901
conda 428.9 kB | linux-64/splicemap-3.3.5.2-0.tar.bz2  6 years and 10 months ago 366 main cf201901
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