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rrikindp

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Evaluation of thermodynamic and kinetic features of RNA-RNA interactions.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::rrikindp

Usage Tracking

0.0.2
0.0.1
2 / 8 versions selected
Downloads (Last 6 months): 0

Description

RRIkinDP evaluated thermodynamic and kinetic features of RNA-RNA interactions. As input, two RNA sequences as well as their interaction structure is provided. The tool generates the state space of all intermediate interactions from single base pair interactions to the full input interaction. On top of this state space it computes the barrier energy for the best direct path from a given start interaction to the full input interaction.

About

Summary

Evaluation of thermodynamic and kinetic features of RNA-RNA interactions.

Last Updated

Feb 27, 2024 at 16:11

License

GPL-3.0-only

Total Downloads

3.4K

Supported Platforms

linux-64
macOS-64