rrikindp
Evaluation of thermodynamic and kinetic features of RNA-RNA interactions.
Evaluation of thermodynamic and kinetic features of RNA-RNA interactions.
To install this package, run one of the following:
RRIkinDP evaluated thermodynamic and kinetic features of RNA-RNA interactions. As input, two RNA sequences as well as their interaction structure is provided. The tool generates the state space of all intermediate interactions from single base pair interactions to the full input interaction. On top of this state space it computes the barrier energy for the best direct path from a given start interaction to the full input interaction.
Summary
Evaluation of thermodynamic and kinetic features of RNA-RNA interactions.
Last Updated
Feb 27, 2024 at 16:11
License
GPL-3.0-only
Total Downloads
3.4K
Supported Platforms
GitHub Repository
https://github.com/mwaldl/RRIkinDPDocumentation
https://doi.org/10.1101/2023.07.28.548983