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RNAshape abstraction maps structures to a tree-like domain of shapes, retaining adjacency and nesting of structural features, but disregarding helix lengths. Shape abstraction integrates well with dynamic programming algorithms, and hence it can be applied during structure prediction rather than afterwards. This avoids exponential explosion and can still give us a non-heuristic and complete account of properties of the molecule's folding space.

Type Size Name Uploaded Downloads Labels
conda 6.5 MB | osx-64/rnashapes-3.4.0-pl5321hac4f329_3.tar.bz2  2 months and 17 days ago 66 main
conda 6.4 MB | osx-arm64/rnashapes-3.4.0-pl5321h6aa7127_3.tar.bz2  2 months and 17 days ago 18 main
conda 5.7 MB | linux-64/rnashapes-3.4.0-pl5321h9948957_3.tar.bz2  2 months and 17 days ago 50 main
conda 5.6 MB | linux-aarch64/rnashapes-3.4.0-pl5321h163da20_3.tar.bz2  2 months and 17 days ago 32 main
conda 5.6 MB | linux-aarch64/rnashapes-3.4.0-pl5321h163da20_2.tar.bz2  9 months and 22 days ago 54 main
conda 5.7 MB | linux-64/rnashapes-3.4.0-pl5321h9948957_2.tar.bz2  9 months and 26 days ago 150 main
conda 6.5 MB | osx-64/rnashapes-3.4.0-pl5321hac4f329_1.tar.bz2  1 year and 2 months ago 511 main
conda 5.6 MB | linux-64/rnashapes-3.4.0-pl5321h4ac6f70_1.tar.bz2  1 year and 2 months ago 145 main
conda 5.6 MB | linux-aarch64/rnashapes-3.4.0-pl5321h78569d1_1.tar.bz2  1 year and 2 months ago 66 main
conda 6.5 MB | osx-64/rnashapes-3.4.0-pl5321hac4f329_0.tar.bz2  1 year and 2 months ago 62 main
conda 5.7 MB | linux-64/rnashapes-3.4.0-pl5321h4ac6f70_0.tar.bz2  1 year and 2 months ago 127 main
conda 5.7 MB | linux-64/rnashapes-3.3.2-pl5321h4ac6f70_3.tar.bz2  2 years and 4 months ago 234 main
conda 6.6 MB | osx-64/rnashapes-3.3.2-pl5321h85dcccf_3.tar.bz2  2 years and 4 months ago 125 main
conda 7.1 MB | osx-64/rnashapes-3.3.2-pl5321hcd10b59_2.tar.bz2  3 years and 7 months ago 9083 main
conda 7.1 MB | osx-64/rnashapes-3.3.0-pl5321hcd10b59_7.tar.bz2  3 years and 7 months ago 2242 main
conda 5.6 MB | linux-64/rnashapes-3.3.0-pl5321h9f5acd7_7.tar.bz2  3 years and 7 months ago 297 main
conda 5.6 MB | linux-64/rnashapes-3.3.2-pl5321h9f5acd7_2.tar.bz2  3 years and 7 months ago 7139 main
conda 5.9 MB | linux-64/rnashapes-3.3.0-pl5321h7d875b9_6.tar.bz2  3 years and 8 months ago 277 main
conda 5.9 MB | linux-64/rnashapes-3.3.2-pl5321h7d875b9_1.tar.bz2  3 years and 8 months ago 7103 main
conda 6.8 MB | osx-64/rnashapes-3.3.0-pl5321hb280591_6.tar.bz2  3 years and 8 months ago 203 main
conda 6.9 MB | osx-64/rnashapes-3.3.2-pl5321hb280591_1.tar.bz2  3 years and 8 months ago 7323 main
conda 6.9 MB | osx-64/rnashapes-3.3.2-pl5262hb280591_0.tar.bz2  4 years and 5 months ago 7770 main
conda 5.9 MB | linux-64/rnashapes-3.3.2-pl5262h7d875b9_0.tar.bz2  4 years and 5 months ago 7269 main
conda 6.0 MB | linux-64/rnashapes-3.3.0-pl5262h7d875b9_5.tar.bz2  4 years and 6 months ago 311 main
conda 505.6 kB | linux-64/rnashapes-2.1.6-h779adbc_4.tar.bz2  4 years and 6 months ago 3241 main

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